Transcript Information: S_Transcript_31637.p1


Annotated TAIR IDAT5G01530.1
Annotated Gene Namelight harvesting complex photosystem II
Annotated Gene Symbol(s)LHCB4.1
Annotation TypeOrtholog
Chromosome Positionchr5:209084-210243 | Forward length=290
E-Value5E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11682.8593677612
Replicate 21826.4185824388
Replicate 32013.5652064792
Condition 2: 8 Hour
Replicate 11709.3403376612
Replicate 21714.0693273313
Replicate 31849.5540458074
Condition 3: 24 Hour
Replicate 11808.22906273
Replicate 21962.6079314373
Replicate 31775.805871254


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31637.p1 GENE.S_Transcript_31637~~S_Transcript_31637.p1 ORF type:complete len:290 (+),score=79.77,Chloroa_b-bind|PF00504.17|2.2e-48 S_Transcript_31637:457-1326(+)
ATGGCCAGCGCCGCCCCCGCCACCGCCTCCTACATCTTCGGGACCCGCATTGCAGGCCTGAAGCCCGGCCCAGGGAGGGTGCAGGCCCTATTAAAATTTGGCAAGAAGAAAGAAGCTGCCCCATCAAAAAAGGCAGCTCCCAAGAAGCCAATAGTGGATGAGGACAGGCCAGTATGGTTCCCGGGTGCAGAACCACCAGAGTGGCTAGATGGTTCCATGGTTGGGGACCGTGGGTTCGACCCATTTGGGCTTGCAAAGCCAGCTGAGTACTTGCAGTTTGACTATGATGGGTTGGACCAGAACCTGGCTAAGAATGTGGCTGGTGACATCATAGGGACTAGGATTGAGACCCCAGATGTTCAGCCTACCCCTTTCCAGCCTTACACTGAGGTTTTTGGTATTCAGAGGTTTAGGGAGTGTGAGGTCATTCATGGCAGGTGGGCCATGCTTGCCACTCTTGGTGCTCTTTCTGTTGAGGCTCTCACTGGTGTCGCCTGGCAAGATGCTGGAAAGGTAGAGTTGATTGAAGGAGCATCATACCTAGGGCAGAAGCTCCCATTCTCACTGACAACATTGATCTGGATTGAGGTCCTACTAGTGGGATACATTGAGTTCCAGAGAAATGCAGAGCTAGACCCCGAAAAGAGGATCTACCCAGGAGGCAAGTACTTTGATCCCCTTGGCTTGGCTGCTGATCCAGAGAAGAAGGAGAGGCTTCAATTGGCCGAGATCAAGCACTCCCGTCTTGCCATGGTTGCCTTCCTTGGCTTCGCCATCCAAGCTGCTGCTACCGAACAGGGTCCTCTTAGCAATGTTGCTGCCTTCTTGAGTGACCCCTCTAACAACATCATCAAGACTTTCTCTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31637.p1 GENE.S_Transcript_31637~~S_Transcript_31637.p1 ORF type:complete len:290 (+),score=79.77,Chloroa_b-bind|PF00504.17|2.2e-48 S_Transcript_31637:457-1326(+)
MASAAPATASYIFGTRIAGLKPGPGRVQALLKFGKKKEAAPSKKAAPKKPIVDEDRPVWFPGAEPPEWLDGSMVGDRGFDPFGLAKPAEYLQFDYDGLDQNLAKNVAGDIIGTRIETPDVQPTPFQPYTEVFGIQRFRECEVIHGRWAMLATLGALSVEALTGVAWQDAGKVELIEGASYLGQKLPFSLTTLIWIEVLLVGYIEFQRNAELDPEKRIYPGGKYFDPLGLAADPEKKERLQLAEIKHSRLAMVAFLGFAIQAAATEQGPLSNVAAFLSDPSNNIIKTFSS*

Click here to download the sequence:
Link to NCBI Protein BLAST