Transcript Information: S_Transcript_316427.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value0.001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.24514210619461
Replicate 31.8442736083601
Condition 2: 8 Hour
Replicate 12.251013422364
Replicate 22.8586251039651
Replicate 32.0131633849149
Condition 3: 24 Hour
Replicate 10.60680231918317
Replicate 21.3850107074434
Replicate 31.1209797513385


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_316427.p1 GENE.S_Transcript_316427~~S_Transcript_316427.p1 ORF type:complete len:180 (+),score=24.83,RVT_1|PF00078.23|9.3e-16 S_Transcript_316427:520-1059(+)
ATGGTTCTTGCTCAAGAGATGGCTTACATGATCAAGAAAGCCTTAAAAAAGAAGCACATTCTCTCCCTTAAGGATGGCTTGACTAAGGCTTTTGATAGCTTAGAGTGGGACTTCACTTGGGATACTCTTATTGGCTTTGGGTTTCCACCAAGGTTCACTAGGTTGGTAATGTCTTGCATCTCTTCCGTTAGAATTTCTGTGCTGTGGAATGGTAAGACTATTGACTCTTTCCCCCCATCTAGGGGGCATTCGTCAAGGAGATCCCCTCTCACCTTATATCTTTGTGCTTTTATGGATCGATTGTCTCAATTGATTGAGTCTAGTGTGTCTAATGGGGACTATATCCCTATTTCGATTGACCGATCCCTCAAATTTTCTCATATTTTCTATGCGGATGATGTTCTCCTGTTTGGTAGAGCAACTCTGTCCAATGTGAATGCCATGATAACTGTCCTAGATAACTTTGGGGAGGCCTCTAGACTTGTGATCAACAAATCTAAGTCTAGGATCATTTCCTCCCTCCATGCACCATCAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_316427.p1 GENE.S_Transcript_316427~~S_Transcript_316427.p1 ORF type:complete len:180 (+),score=24.83,RVT_1|PF00078.23|9.3e-16 S_Transcript_316427:520-1059(+)
MVLAQEMAYMIKKALKKKHILSLKDGLTKAFDSLEWDFTWDTLIGFGFPPRFTRLVMSCISSVRISVLWNGKTIDSFPPSRGHSSRRSPLTLYLCAFMDRLSQLIESSVSNGDYIPISIDRSLKFSHIFYADDVLLFGRATLSNVNAMITVLDNFGEASRLVINKSKSRIISSLHAPSV*

Click here to download the sequence:
Link to NCBI Protein BLAST