Transcript Information: S_Transcript_31679.p1


Annotated TAIR IDAT5G28900.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:10925852-10929892 | Forward length=536
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.06283472863
Replicate 229.417052743353
Replicate 329.918216313396
Condition 2: 8 Hour
Replicate 127.446567167421
Replicate 226.183348778347
Replicate 326.684283298088
Condition 3: 24 Hour
Replicate 127.87245319448
Replicate 227.238543913054
Replicate 326.950221521763


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31679.p1 GENE.S_Transcript_31679~~S_Transcript_31679.p1 ORF type:complete len:540 (+),score=110.97,EF-hand_7|PF13499.2|4.6,EF-hand_7|PF13499.2|0.073,EF-hand_7|PF13499.2|0.59,EF-hand_7|PF13499.2|9.8e-20,EF-hand_6|PF13405.2|0.16,EF-hand_6|PF13405.2|1.5e+03,EF-hand_6|PF13405.2|1.2,EF-hand_6|PF13405.2|5.1e+02,EF-hand_6|PF13405.2|0.012,EF-hand_1|PF00036.28|0.027,EF-hand_1|PF00036.28|3.2e+02,EF-hand_1|PF00036.28|17,EF-hand_1|PF00036.28|5.7e+03,EF-hand_1|PF00036.28|0.0031,EF-hand_5|PF13202.2|6.8e+03,EF-hand_5|PF13202.2|0.06,EF-hand_5|PF13202.2|8.9e+02,EF-hand_5|PF13202.2|1.8e+03,EF-hand_5|PF13202.2|0.0013,EF-hand_8|PF13833.2|19,EF-hand_8|PF13833.2|87,EF-hand_8|PF13833.2|5.4e+02,EF-hand_8|PF13833.2|0.27 S_Transcript_31679:602-2221(+)
ATGGAGATGGATTTCAATGGAGATTTGGTATCGCTTGACGCTGAATTGTTACAGTTACCTGAGGTTTCGCCTATGGCTCTTAAATCCAACCCGTACCTTGCTCAAGAACTCTTCGAACAGTGGCTTTCCCTTCCTGAAACCAATCGTCTGGTGAAATCATTGGTTAATGATGCAAAAGCTGGGAATCCTTTAAATGTCCCTGGAAATGCTTCTAGTGGAAATGCTGCTGCTAGCAATACAATACCATCCATGTTTCCTGCTGGGAGTGCACCTCCACTTTCACCGAGAAGTTCCTCGGGTTCTCCCCGCATTATGAAACAGAGGGCAGGTCCTTCATCCCTAGGAAGTCCTCTGAAAGTTTTGAGTGAGCCAGTGAAAGAGCTGATACCTCAGTTCTACTTTCAGAATGGCCGTCCACCACCAAAGGAACTAAAGGAGCGATGCTTGTTTAGAATAAATCAGTTCTACTATGGTCATACAGAAGGCCTTCAATTGGCTGATTTCAAAGCTGTTACAAAGGAAATTTGCAAGCTTCCATCATTCTTCTCTCCTGTCCTTTTCCAAAAGATTGATGTTAATGGCACAGGATTTGTCACCAGGGATGCATTTGTTGATTACTGGGTCAATGGCAACATGCTGACCATGGACACAGCAACGCAAATCTATACTATCATGAAGAAACCAGATCACAAGTTTTTGACACAGGATGACTTTAAGCCTGTTCTTCGCGAGCTTTTGGCGACTCATCCTGGACTGGAGTTTTTGCAGAGTACACCTGAATTTCAAGAGAGATATGCGGAGACTGTAATATACAGAATTTTTTACTATATTAATAGAGCGGGAAATGGTCAGCTAACTCTCAGGGAGCTGAAGCGTGGTAATTTAATAGCTGCTATGCAACATGCTGATGAGGAAGAGGACATCAATAAAGTGCTCAGGTACTTCTCCTATGAGCACTTTTATGTGATATATTGCAAGTTCTGGGAGTTGGATACAGATCATGATTTCTTGATCGACAAAGAAAACCTAATTAGATATGGGAACCATGCACTTACCTACAGAATTGTTGATAGAATATTTTCTCAGGTTCCAAGAAAGTTCACTAGTACTGTGGAAGGCAAGATGGGATATGAAGATTTTGTTTACTTCATCTTGGCAGAGGAGGATAAATCTTCAGAACCGAGTCTTGAGTACTGGTTCAAATGCGTAGACTTGGATGGCAATGGAGTTATCACCCGAAATGAAATGCAATTCTTTTACGAGGAGCAGTTGCATCGAATGGAATGCATGGCTCAAGAGCCTGTGCTTTTTGAAGATATCTTGTGTCAAATCATTGACATGATTGGGCCTGAGAACGAGAGTTATTTTACCATTCGCGATCTGAAAGGAAGTAAACTTTCAGGAAGTGTTTTTAACATCCTCTTCAATCTAAACAAGTTCATGGCCTTCGAAACTCGTGATCCGTTCCTTATTCGCCAGGAGAGGGAGAACCCAACCTTGACAGAGTGGGATCGCTTTGCACATAGAGAATATATCAGGCTTTCAATGGAAGAAGATGTTGAAGATGCTTCTAACGGAAGTGCTGAAGTCTGGGATGAATCTCTTGAGGCTCCCTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31679.p1 GENE.S_Transcript_31679~~S_Transcript_31679.p1 ORF type:complete len:540 (+),score=110.97,EF-hand_7|PF13499.2|4.6,EF-hand_7|PF13499.2|0.073,EF-hand_7|PF13499.2|0.59,EF-hand_7|PF13499.2|9.8e-20,EF-hand_6|PF13405.2|0.16,EF-hand_6|PF13405.2|1.5e+03,EF-hand_6|PF13405.2|1.2,EF-hand_6|PF13405.2|5.1e+02,EF-hand_6|PF13405.2|0.012,EF-hand_1|PF00036.28|0.027,EF-hand_1|PF00036.28|3.2e+02,EF-hand_1|PF00036.28|17,EF-hand_1|PF00036.28|5.7e+03,EF-hand_1|PF00036.28|0.0031,EF-hand_5|PF13202.2|6.8e+03,EF-hand_5|PF13202.2|0.06,EF-hand_5|PF13202.2|8.9e+02,EF-hand_5|PF13202.2|1.8e+03,EF-hand_5|PF13202.2|0.0013,EF-hand_8|PF13833.2|19,EF-hand_8|PF13833.2|87,EF-hand_8|PF13833.2|5.4e+02,EF-hand_8|PF13833.2|0.27 S_Transcript_31679:602-2221(+)
MEMDFNGDLVSLDAELLQLPEVSPMALKSNPYLAQELFEQWLSLPETNRLVKSLVNDAKAGNPLNVPGNASSGNAAASNTIPSMFPAGSAPPLSPRSSSGSPRIMKQRAGPSSLGSPLKVLSEPVKELIPQFYFQNGRPPPKELKERCLFRINQFYYGHTEGLQLADFKAVTKEICKLPSFFSPVLFQKIDVNGTGFVTRDAFVDYWVNGNMLTMDTATQIYTIMKKPDHKFLTQDDFKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRAGNGQLTLRELKRGNLIAAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQVPRKFTSTVEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCVDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENESYFTIRDLKGSKLSGSVFNILFNLNKFMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF*

Click here to download the sequence:
Link to NCBI Protein BLAST