Transcript Information: S_Transcript_316893.p1


Annotated TAIR IDAT3G19360.1
Annotated Gene NameZinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6707544-6708864 | Forward length=386
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66201495609902
Replicate 20
Replicate 30.36701962355424
Condition 2: 8 Hour
Replicate 11.1670611616341
Replicate 20.22260545910176
Replicate 30.63629395835765
Condition 3: 24 Hour
Replicate 10.6520860743461
Replicate 20.56377640737182
Replicate 30.12548280798565


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_316893.p1 GENE.S_Transcript_316893~~S_Transcript_316893.p1 ORF type:complete len:201 (+),score=34.17,zf-CCCH|PF00642.20|2.5e-09,zf-CCCH|PF00642.20|7.3,zf-CCCH|PF00642.20|5.5e-06,zf-CCCH_2|PF14608.2|0.00032,zf-CCCH_2|PF14608.2|1.5e+04,zf-CCCH_2|PF14608.2|0.84,zf-CCCH_2|PF14608.2|0.86,Torus|PF16131.1|0.00062,Torus|PF16131.1|0.34,Torus|PF16131.1|6.5 S_Transcript_316893:593-1195(+)
ATGGATAGTCCTTTATTTGCTTCGCAAGTTTCTATGCAACCTTGTGGGATGGGTGTTGTTCCTCAATGTCAGATTGAAGATCTAACTTCTAAGAAGCCAAGAATCATGGGCAAGACTGTACTATGCAGGAATTTTATGGCAAAGGGTAGATGCAGATATGGGGAGAATTGCATTTTTGCTCATAGCCTTGAAGAAAAGAGTAACCAACTTCAATGGCAGAATTCTGTCACTGCTGGAAAAATGGTTAGAAACTTGAATGTGGTTGAGAACACCTACAAAAGGGGAACCTGCAGGTTCATTTTCTCCAAGGGAGGATGTCCATATGGGAAATTGTGCATTTTTGGGCATCCAGAGCTAGAGAATTCTGAGGATGAGCGAGGCATGACTTGGGATAGTTCTGTTATCAGCATTAAGACAGCTGATTCAAATCCGAAAAGTGATCCTCGGTCCAAGACCAAGCTATGCCACCAATGGACGATGTTCAGTAGTTGTGATTATGGTGCAAAATGCGTTTACGCCCATGGACGACAAGGTAATAGCCAATGCAGTTTGTGCCCTTTGGATTTCTGCTGTGTTCTTGTCTTGCTCAGTATTGATGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_316893.p1 GENE.S_Transcript_316893~~S_Transcript_316893.p1 ORF type:complete len:201 (+),score=34.17,zf-CCCH|PF00642.20|2.5e-09,zf-CCCH|PF00642.20|7.3,zf-CCCH|PF00642.20|5.5e-06,zf-CCCH_2|PF14608.2|0.00032,zf-CCCH_2|PF14608.2|1.5e+04,zf-CCCH_2|PF14608.2|0.84,zf-CCCH_2|PF14608.2|0.86,Torus|PF16131.1|0.00062,Torus|PF16131.1|0.34,Torus|PF16131.1|6.5 S_Transcript_316893:593-1195(+)
MDSPLFASQVSMQPCGMGVVPQCQIEDLTSKKPRIMGKTVLCRNFMAKGRCRYGENCIFAHSLEEKSNQLQWQNSVTAGKMVRNLNVVENTYKRGTCRFIFSKGGCPYGKLCIFGHPELENSEDERGMTWDSSVISIKTADSNPKSDPRSKTKLCHQWTMFSSCDYGAKCVYAHGRQGNSQCSLCPLDFCCVLVLLSIDV*

Click here to download the sequence:
Link to NCBI Protein BLAST