Transcript Information: S_Transcript_316894.p1


Annotated TAIR IDAT3G19360.1
Annotated Gene NameZinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6707544-6708864 | Forward length=386
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4158281442997
Replicate 20.25854831512713
Replicate 30.64837744043908
Condition 2: 8 Hour
Replicate 10.66641844741041
Replicate 20.69912026999146
Replicate 30.49959017824175
Condition 3: 24 Hour
Replicate 10
Replicate 20.44265256985054
Replicate 31.1822833314898


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_316894.p1 GENE.S_Transcript_316894~~S_Transcript_316894.p1 ORF type:complete len:256 (+),score=54.51,zf-CCCH|PF00642.20|3.5e-09,zf-CCCH|PF00642.20|8.3,zf-CCCH|PF00642.20|2.5e-05,zf-CCCH_2|PF14608.2|0.00044,zf-CCCH_2|PF14608.2|1.1,zf-CCCH_2|PF14608.2|1.2,Torus|PF16131.1|0.00093,Torus|PF16131.1|0.49,Torus|PF16131.1|7 S_Transcript_316894:98-865(+)
ATGGATAGTCCTTTATTTGCTTCGCAAGTTTCTATGCAACCTTGTGGGATGGGTGTTGTTCCTCAATGTCAGATTGAAGATCTAACTTCTAAGAAGCCAAGAATCATGGGCAAGACTGTACTATGCAGGAATTTTATGGCAAAGGGTAGATGCAGATATGGGGAGAATTGCATTTTTGCTCATAGCCTTGAAGAAAAGAGTAACCAACTTCAATGGCAGAATTCTGTCACTGCTGGAAAAATGGTTAGAAACTTGAATGTGGTTGAGAACACCTACAAAAGGGGAACCTGCAGGTTCATTTTCTCCAAGGGAGGATGTCCATATGGGAAATTGTGCATTTTTGGGCATCCAGAGCTAGAGAATTCTGAGGATGAGCGAGGCATGACTTGGGATAGTTCTGTTATCAGCATTAAGACAGCAGATTCAAATTCGAAAACTGATCCTCAGTCCAAGACCAAGCAATGCCACCGATGGACGATGTTCAGTAGTTGTGATTATGGTGCAAAATGCGTTTACGCCCATGGACAACAAGAGTTGAAGGGATCTTCCCCCTCTTTTGCTTCAGAATATGGGAGTACATGGATTCCTCCAAGAACCTGGAAGAAGGATGACCTACCTTATAATGTAGGAGGAAAAAGTGATCAGCAGAAAGCGCCACAAAATACATGCTTACTCAAATGGAAAAGGATGAGGAAGATTGCTGGGATTTATGCTGATTGGATTGATGACGAATCCCCCTTGCTCTGCTCAGTTAGTGAGCAAGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_316894.p1 GENE.S_Transcript_316894~~S_Transcript_316894.p1 ORF type:complete len:256 (+),score=54.51,zf-CCCH|PF00642.20|3.5e-09,zf-CCCH|PF00642.20|8.3,zf-CCCH|PF00642.20|2.5e-05,zf-CCCH_2|PF14608.2|0.00044,zf-CCCH_2|PF14608.2|1.1,zf-CCCH_2|PF14608.2|1.2,Torus|PF16131.1|0.00093,Torus|PF16131.1|0.49,Torus|PF16131.1|7 S_Transcript_316894:98-865(+)
MDSPLFASQVSMQPCGMGVVPQCQIEDLTSKKPRIMGKTVLCRNFMAKGRCRYGENCIFAHSLEEKSNQLQWQNSVTAGKMVRNLNVVENTYKRGTCRFIFSKGGCPYGKLCIFGHPELENSEDERGMTWDSSVISIKTADSNSKTDPQSKTKQCHRWTMFSSCDYGAKCVYAHGQQELKGSSPSFASEYGSTWIPPRTWKKDDLPYNVGGKSDQQKAPQNTCLLKWKRMRKIAGIYADWIDDESPLLCSVSEQE*

Click here to download the sequence:
Link to NCBI Protein BLAST