Transcript Information: S_Transcript_317165.p1


Annotated TAIR IDAT3G25690.1
Annotated Gene NameHydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)CHUP1
Annotation TypeHomolog
Chromosome Positionchr3:9354061-9357757 | Forward length=1004
E-Value2E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25589424264597
Replicate 20.28285627637839
Replicate 30
Condition 2: 8 Hour
Replicate 10.34175304995405
Replicate 20
Replicate 30.27328009749976
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_317165.p1 GENE.S_Transcript_317165~~S_Transcript_317165.p1 ORF type:5prime_partial len:312 (+),score=57.35 S_Transcript_317165:2-937(+)
CCAAATCCGCCACCAAGACCTTCATGTGACAATTCAACTATTTGTAAGGAAGATCAAGCTTCTATAGCGGCACATCCCCCGCCACCTCCTCCTCCACCACCACCACCATCTCGGTTTTCAGTAGGCAATACTTGTTCTAGTGCTGTGCAGCGTGCACCACAGGTAGTGGAATTCTATCATTCACTAATGAAAAGGGATACGCGAAGAGACTCTACTGGTGGAGCAATCTGTGACAGCCCCAATGTGGCAAGTGTCCGAAGCAATATGATTGGTGAAATTGAGAATCGGTCTTCTTACTTGCTCGCTATAAAGGCAGATGTTGAGACTCAAGGAGAATTTGTGAATTCGTTGATTAGAGAAGTTAAAAAGGCTGTTTACCGAGATATAGAGGACGTTTTGGCATTCGTCAATTGGCTGGATGATGAGCTTTGCTTCCTGGTGGATGAAAGGGCAGTTTTGAAGCACTTTGATTGGCCAGAGAAGAAAGCTGACACATTAAGAGAAGCAGCATTTGGCTACAAAGATTTAAAGAAACTAGAGTCAGAAGTCACTAATTATCATGATGATCCTCGGCTGCCCTGTGACATTGCCCTGGAGAAAATGGTTTCTTTGTCTGAGAAGAACGAGCATACAATTTATAACCTTCTTCGAACAAGAGACTCATTGATTCGTAGCTGTAAGGAATTCAAAATTCCTACAGAATGGATGCTTGACAGTGGAATCATAAGCAAGGTAAAGCTCGGCTCAGTAAAATTGGCAAAGAAATACATGAACAGAGTGGCTACAGAACTCCAATCCCGGACATCTCTCGATAAAGATCCCGCAATGGACTACATGCTCCTTCAAGGAGTGAGGTTTGCCTTCAGAATCCATCAGGTTAGTTGCAAGTGTCTTACAGTTCCTGTAGCAATGGCTTCTATAGTTTTATTTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_317165.p1 GENE.S_Transcript_317165~~S_Transcript_317165.p1 ORF type:5prime_partial len:312 (+),score=57.35 S_Transcript_317165:2-937(+)
PNPPPRPSCDNSTICKEDQASIAAHPPPPPPPPPPPSRFSVGNTCSSAVQRAPQVVEFYHSLMKRDTRRDSTGGAICDSPNVASVRSNMIGEIENRSSYLLAIKADVETQGEFVNSLIREVKKAVYRDIEDVLAFVNWLDDELCFLVDERAVLKHFDWPEKKADTLREAAFGYKDLKKLESEVTNYHDDPRLPCDIALEKMVSLSEKNEHTIYNLLRTRDSLIRSCKEFKIPTEWMLDSGIISKVKLGSVKLAKKYMNRVATELQSRTSLDKDPAMDYMLLQGVRFAFRIHQVSCKCLTVPVAMASIVLFF*

Click here to download the sequence:
Link to NCBI Protein BLAST