Transcript Information: S_Transcript_317235.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value8E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43988431793687
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.52872868554875
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.41689329595233


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_317235.p1 GENE.S_Transcript_317235~~S_Transcript_317235.p1 ORF type:complete len:121 (+),score=8.49,zf-RVT|PF13966.2|4e-13,zf-RVT|PF13966.2|1.7e+03 S_Transcript_317235:73-435(+)
ATGGTTCCTAAACTTCAGGTTATCACTTGGTTGGCCTTCAAAAAAGCGCTACCTACTGTCGATCTTATTAACACCAGGGGGCTAGTAATGGTGAATAGATGTGAACTATGTCAATTAGAGGCTGAAACTCATGAACATTTATTTTTCAAGTGCCACTTCTCAACAACTATTATGAAAGGAGTTGCACACTGGCTGCACATGGGAGATTGCCCTACAAATTTTGATATATGGCCAGGATGGATAATGAAGAGGAAGCATAGAAAATACAGGAGGTGGATTTATTGCAGGACTTGCAGCTGTTATCTATTTTATTTGGAGAAGCAGGAACTTGATCATCTTCCAGAACCAACCCAGCACTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_317235.p1 GENE.S_Transcript_317235~~S_Transcript_317235.p1 ORF type:complete len:121 (+),score=8.49,zf-RVT|PF13966.2|4e-13,zf-RVT|PF13966.2|1.7e+03 S_Transcript_317235:73-435(+)
MVPKLQVITWLAFKKALPTVDLINTRGLVMVNRCELCQLEAETHEHLFFKCHFSTTIMKGVAHWLHMGDCPTNFDIWPGWIMKRKHRKYRRWIYCRTCSCYLFYLEKQELDHLPEPTQHS*

Click here to download the sequence:
Link to NCBI Protein BLAST