Transcript Information: S_Transcript_317236.p1


Annotated TAIR IDAT1G60720.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22357072-22357941 | Forward length=289
E-Value4E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53945272774014
Replicate 20
Replicate 30.12461308164595
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.14760056412564
Replicate 20
Replicate 30.17041921895349


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_317236.p1 GENE.S_Transcript_317236~~S_Transcript_317236.p1 ORF type:complete len:148 (+),score=15.92,zf-RVT|PF13966.2|1.4e-17,zf-RVT|PF13966.2|3.8e+03 S_Transcript_317236:33-476(+)
ATGGGCTCAAGGGCCAAATCTGCTACCACTGAACTGGTATGGGGTCAATATTCCATGCCAGAGCATGCTATATTTATGTGGTTAGCTATCCAATCGAGACTGTTGACTAAAGATAGGCTCATCAGATTCCAGATTCTAGTAGATGATCATAACTGTGTTTTTTGCCAGCAAGAGCTTGAATCTCATGAACATTTATTTTTCAGGTGTCAATTCTCAACATCTATTCTGAGAGGAGTTGCAAAGTGGCTGCAAATGGGAGGTTGCCCTACAAATTTTGATAAATGGCCAAGGTGGATTATGAAGAGGAAGAATAACAAATACAGGAGGTGGATATACTATGCAGGAATTGCAGCTACTGTCTACTTTTTCTGGAGAAGCAGGAGCTTGGTTATCTTCCAGAATCAAATCATTACTCCTAGGTTGGTTATTGCACAAATCCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_317236.p1 GENE.S_Transcript_317236~~S_Transcript_317236.p1 ORF type:complete len:148 (+),score=15.92,zf-RVT|PF13966.2|1.4e-17,zf-RVT|PF13966.2|3.8e+03 S_Transcript_317236:33-476(+)
MGSRAKSATTELVWGQYSMPEHAIFMWLAIQSRLLTKDRLIRFQILVDDHNCVFCQQELESHEHLFFRCQFSTSILRGVAKWLQMGGCPTNFDKWPRWIMKRKNNKYRRWIYYAGIAATVYFFWRSRSLVIFQNQIITPRLVIAQIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST