Transcript Information: S_Transcript_317238.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value8E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.20491928981778
Condition 2: 8 Hour
Replicate 10.47389756260296
Replicate 20.24857609599696
Replicate 30
Condition 3: 24 Hour
Replicate 10.48544185534654
Replicate 20.25182012862608
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_317238.p1 GENE.S_Transcript_317238~~S_Transcript_317238.p1 ORF type:complete len:90 (+),score=5.00,zf-RVT|PF13966.2|9.1e-16,zf-RVT|PF13966.2|3e+03 S_Transcript_317238:73-342(+)
ATGGTTCCTAAACTTCAGGTTATCACTTGGTTGGCCTTCAAAAAAGCGCTACCTACTGTCGATCTTATTAACACCAGGGGGCTAGTAATGGTGAATAGATGTGAACTATGTCAATTAGAGGCTGAAACTCATGAACATTTATTTTTCCAGTGCTTATTTGCTCGAGAGATCTGGCATAACATAGCTGCTTGGCTGGGATATAGGAGAAGGGTGGAAAGTTTGTGGAAACAGATGAGGTGTCTGTCAAAACATAACAGAGGTAAAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_317238.p1 GENE.S_Transcript_317238~~S_Transcript_317238.p1 ORF type:complete len:90 (+),score=5.00,zf-RVT|PF13966.2|9.1e-16,zf-RVT|PF13966.2|3e+03 S_Transcript_317238:73-342(+)
MVPKLQVITWLAFKKALPTVDLINTRGLVMVNRCELCQLEAETHEHLFFQCLFAREIWHNIAAWLGYRRRVESLWKQMRCLSKHNRGKN*

Click here to download the sequence:
Link to NCBI Protein BLAST