Transcript Information: S_Transcript_31727.p1


Annotated TAIR IDAT5G08430.1
Annotated Gene NameSWIB/MDM2 domain;Plus-3;GYF
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2716974-2720095 | Forward length=553
E-Value8E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2977517522652
Replicate 27.1258699191973
Replicate 36.1857624131331
Condition 2: 8 Hour
Replicate 15.8280569810798
Replicate 25.6971788461416
Replicate 36.3550353108019
Condition 3: 24 Hour
Replicate 17.3946965853254
Replicate 24.9973000680766
Replicate 36.5013344274057


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31727.p1 GENE.S_Transcript_31727~~S_Transcript_31727.p1 ORF type:complete len:322 (+),score=79.53,SWIB|PF02201.14|3e-11,Plus-3|PF03126.14|2e-10 S_Transcript_31727:258-1223(+)
ATGTACAATAGCAATGAGCCAGCACCTTTCCTATGGATTGAGGACGGCAAAGAGCAAGCCATTACACCGAGGACAAGAAAATGGACGAAAAAGAAAAAGGAATTTCTGGGGTGGGGTTCGAGACAGCTCATAGAATTTTTGGAATCAATTGGCAAGGAGACTGAGAAGGCGATATCTCAGGATGATGTCACTGAGATCATCAATAAGTATGTCAATGGGAACAATCTCATTCATCCTGAAAAGAAGAAGAAGGTGTTGTGTGATGATAGGCTCCTAGCTCTCTTTGGGAGGAAGGCTATATTTCGGAATAAGATATACGACCTCTTGGAAGCACACTTGGCTGAGAATCAACTTAATTCAGATGATGACCTTTTCTACAGCTCAGACGAAAAGGAAGAACAGTCCTTCAGGTGCAAGAAGCCAAAAGTCTCAGGCGTGGACAGGAAAACCCAGCCCAAGAAGAAGGCTGCAGAAGTTCCAAAAAGCAGTTTGGCAGCTATCATTCCTGAAAACATCAAGCCCGTGCATCTGAAAAGGAGTCTGATTCAAGAGCTTCTCAAGCAACCAGAGACATTTGAGGGAAAAGTCGTGGGAAGCTTTGTGAGGATCAAATCTGATCCATTTGATGTCTTTCAGATGAATTCTCATCAGCTTGAACTTGTAACAGGTGTAAAGGCAGGTGATGCAGCTAATGCCCCTACCATTTTGCAGATTTCAGGTGTGACAAGTGAAATTAGCATAAAAGCAATTTCAGAAGATAATTTTTCTGAGGAAGAGTGCGGAGATTTACACCGAAGAGTCAAAGATGGTTTAATAAAGCAGCCTACTGTAGGGGAGCTTGAGCAAAAAGTTGAAATTTTGCATGAGGACATCACAAAACATGTATGTATGTTTTGCAAAAAGGTTCCATCTGGCTCTTTGCTGCTTACCTGCTACTGTTTGCCAGTTCACTTGATCGTGTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31727.p1 GENE.S_Transcript_31727~~S_Transcript_31727.p1 ORF type:complete len:322 (+),score=79.53,SWIB|PF02201.14|3e-11,Plus-3|PF03126.14|2e-10 S_Transcript_31727:258-1223(+)
MYNSNEPAPFLWIEDGKEQAITPRTRKWTKKKKEFLGWGSRQLIEFLESIGKETEKAISQDDVTEIINKYVNGNNLIHPEKKKKVLCDDRLLALFGRKAIFRNKIYDLLEAHLAENQLNSDDDLFYSSDEKEEQSFRCKKPKVSGVDRKTQPKKKAAEVPKSSLAAIIPENIKPVHLKRSLIQELLKQPETFEGKVVGSFVRIKSDPFDVFQMNSHQLELVTGVKAGDAANAPTILQISGVTSEISIKAISEDNFSEEECGDLHRRVKDGLIKQPTVGELEQKVEILHEDITKHVCMFCKKVPSGSLLLTCYCLPVHLIVC*

Click here to download the sequence:
Link to NCBI Protein BLAST