Transcript Information: S_Transcript_31728.p2


Annotated TAIR IDAT5G08430.1
Annotated Gene NameSWIB/MDM2 domain;Plus-3;GYF
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2716974-2720095 | Forward length=553
E-Value7E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2304685165974
Replicate 28.411899697514
Replicate 37.2784042069059
Condition 2: 8 Hour
Replicate 17.6314941937566
Replicate 27.7066903340864
Replicate 37.2003364819502
Condition 3: 24 Hour
Replicate 18.3288184546078
Replicate 26.8976817841057
Replicate 36.5796637578564


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31728.p2 GENE.S_Transcript_31728~~S_Transcript_31728.p2 ORF type:complete len:299 (+),score=61.79,GYF|PF02213.12|8.8e-09 S_Transcript_31728:1359-2255(+)
ATGTATATGACTGTCTCCCATGTTTCCCAAGTGCTTGCCCTGTGGTGCATTTTGTCTGCCTTTACTAGCACTACAGTAACAGAGTACTTGGGCAAAAGGAAGCTGCTTCAAACTCCTTCTGAACAATCACGCTTGCTGAGTGAGATCCCAAAAGTGAAAGCAGAAGTGCAGGTTGAGACTATTCCAGATGGTCCGCCAGATGGTGTAAATCAAAGCACTGATGATTCACCTAAAGTTACTGATTGGGACTGGGAACCTTACTATGGTTCAGCAGCTAAAGGAGCTGCAACAGAAGTCTCAACTAAGCAGGATGCTAAAGAAAAAATAGAAATCAGAACAAGCAATGGTGATGCTCAGTGCATAAATCCCCAAGAGGTAGCTGCCCTTCCTGAAGCAGAGGCAACAAGAGTAGAAAGCAATGGGCATGTTCATTCCTATCAACCAGAAGATAAACATTTTCCTAAGATGGAAACAGTTGGAGTGGTAAGCAACAGTCATACTGTAACCAAGATTTTAAGGTCAGATCCTACACGGATCTACAGGACAGAAGAAACAGGGGTATTTAAAAATGGGCATGTTGAGGTGCCAACTTCGAAAGCAACAGATGGCATGGAAAGTATAGAAAGGAAACAAGTGCAGGTGATTGATTTGAGTGACGAGGATGAGGAACCCAAGGTTTTTTGTATCAAGAAACCGATTCGTAATCCCCTTGAAGAATTGATGTGGTATTACATTGACCCTCAGGAGAATTACCAGGGGGCATTCTCGTTGGCATCTCTAAAGCGATGGAGGGATGCAGACTATTTCCCACCCCATTTCAGAGTCTGGAAGGCCGGTCAGAGTCCAAAGGAAGCAGTTTTGTTGAGCGATATTCTTCGACAAACTTTGTCGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31728.p2 GENE.S_Transcript_31728~~S_Transcript_31728.p2 ORF type:complete len:299 (+),score=61.79,GYF|PF02213.12|8.8e-09 S_Transcript_31728:1359-2255(+)
MYMTVSHVSQVLALWCILSAFTSTTVTEYLGKRKLLQTPSEQSRLLSEIPKVKAEVQVETIPDGPPDGVNQSTDDSPKVTDWDWEPYYGSAAKGAATEVSTKQDAKEKIEIRTSNGDAQCINPQEVAALPEAEATRVESNGHVHSYQPEDKHFPKMETVGVVSNSHTVTKILRSDPTRIYRTEETGVFKNGHVEVPTSKATDGMESIERKQVQVIDLSDEDEEPKVFCIKKPIRNPLEELMWYYIDPQENYQGAFSLASLKRWRDADYFPPHFRVWKAGQSPKEAVLLSDILRQTLSK*

Click here to download the sequence:
Link to NCBI Protein BLAST