Transcript Information: S_Transcript_317552.p1


Annotated TAIR IDAT5G41800.1
Annotated Gene NameTransmembrane amino acid transporter family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16733842-16735888 | Forward length=452
E-Value2.8E-255
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1462097770307
Replicate 22.7133672641298
Replicate 32.0822443965355
Condition 2: 8 Hour
Replicate 13.4825738219512
Replicate 23.8338853515661
Replicate 33.9537459267304
Condition 3: 24 Hour
Replicate 11.9818946715257
Replicate 22.4217379305371
Replicate 32.7967992787931


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_317552.p1 GENE.S_Transcript_317552~~S_Transcript_317552.p1 ORF type:5prime_partial len:496 (+),score=46.35,Aa_trans|PF01490.14|4e-60 S_Transcript_317552:3-1490(+)
CCCATTGATATGATAGCTCATAAGCCTCTTTTAGTTCCCTCCTGTTCCGAACCTCTCTCTCTCTATCTCTCTATCTCAATCTCTACCTCTATTAGTACCAATCAGTACTACCAGATGCCAGAGGATCCGATCAGATTAAATGGGCATGAGAGAAAAACCTCATCGACCCGACTGGAAAACGACGCCGGAGCGCAATTTGTGTTGGAATCAAAGGGAGAGTGGTGGCATGCAGGGTACCACCTGACGACGGCCATAGTGGGGCCCACAATACTGACCTTGCCGTACGTTTTCCGAGGACTTGGTTGGGGTTTGGGGTTTTTCTCCCTAACCGTTATGGGGGTGGTTACATTCTACGCCTACTATCTTATGTCCCTTGTTCTTGATTTCTGTGAACAACAAGGCCGCCGCCATATTCGTTTCCGGGAACTCGCCTCCGATGTGTTAGGTTCTGGCTGGATGTACTATTTCGTAGTATCCACCCAAACAGCCATTAACTGTGGCATAGGGATTGGAGCAATCCTTCTTGCAGGGGAATGCCTTGAGATTTTGTACTCAAGTCTCTCACCACATGGTTCGTTGAAGTTGTACCATTTCATAATGATGGTGACGGTGGTGATGATTGTACTCTCCCAGTTGCCAACCTTCCACTCTCTAAGACACATCAACTTGGGTTCACTGCTTCTTAGTTTGGGCTACAGCTTCCTGGTGGTTGCAGCATGTACCATTGCAGGTAAATCAAAGCATGCCCCTCGAAAGAGCTATTCTTTGGAATCTTCAGAGGCTTCTAGAGTTTTTAATGCATTCAATTCCATCTCCATAATAGCTGCAATATTCGGGAATGGTATACTACCTGAAATACAAGCAACTCTGGCTCCTCCAGCAACTGGGAAGATGCTGAAAGGCCTTTCAATGTGTTATACTGTCATATTCATCACCTTTTACTTCGTTGCTATTTCTGGATATCACACGTTTGGCAACAAATCTGCTTCTAATATACTTAAGAGCCTCGTACCTGATGATGGACCTGCTTTAGCTCCAACATGGATTATAGGCCTTGCTGTAGTCTTTATTCTTCTGCAGCTTTTTGCCATCGGCTTGGTCTACTCCCAAGTAGCTTTCGAGATCATGGAAAAGAAATCAGCTGATACAAGCCAAGGGATATTCTCCAAGAGAAACCTCATCCCTAGGTTAATTCTGCGTACGACATACATGATTCTTTGCGGTTTCTTTGCTGCAATGCTCCCATTTTTTGGGGACATCAATGCGGTGGTAGGAGCCATCGGCTTCATTCCCTTAGACTTCATACTTCCGATGCTTATGTACAACTTGACTTACAAGCCCTCAAAATCATCCTTTGCATACTGGATCAACATCTCTATCATCGTCATTTTCTCTGGCGTGGGACTTTTAGGGGCATTCTCCTCGATGAGGAAGTTGATTCTTGATGCTAACCAGTTCAAGCTCTTTAGCAGCAATATAGTGGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_317552.p1 GENE.S_Transcript_317552~~S_Transcript_317552.p1 ORF type:5prime_partial len:496 (+),score=46.35,Aa_trans|PF01490.14|4e-60 S_Transcript_317552:3-1490(+)
PIDMIAHKPLLVPSCSEPLSLYLSISISTSISTNQYYQMPEDPIRLNGHERKTSSTRLENDAGAQFVLESKGEWWHAGYHLTTAIVGPTILTLPYVFRGLGWGLGFFSLTVMGVVTFYAYYLMSLVLDFCEQQGRRHIRFRELASDVLGSGWMYYFVVSTQTAINCGIGIGAILLAGECLEILYSSLSPHGSLKLYHFIMMVTVVMIVLSQLPTFHSLRHINLGSLLLSLGYSFLVVAACTIAGKSKHAPRKSYSLESSEASRVFNAFNSISIIAAIFGNGILPEIQATLAPPATGKMLKGLSMCYTVIFITFYFVAISGYHTFGNKSASNILKSLVPDDGPALAPTWIIGLAVVFILLQLFAIGLVYSQVAFEIMEKKSADTSQGIFSKRNLIPRLILRTTYMILCGFFAAMLPFFGDINAVVGAIGFIPLDFILPMLMYNLTYKPSKSSFAYWINISIIVIFSGVGLLGAFSSMRKLILDANQFKLFSSNIVD*

Click here to download the sequence:
Link to NCBI Protein BLAST