Transcript Information: S_Transcript_317561.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value6E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1598886736883
Replicate 21.5492031408424
Replicate 31.1163883827845
Condition 2: 8 Hour
Replicate 10.72289458702146
Replicate 20.54169125035658
Replicate 30.82579554886126
Condition 3: 24 Hour
Replicate 11.1107567876573
Replicate 21.6462817125676
Replicate 30.67177357979728


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_317561.p1 GENE.S_Transcript_317561~~S_Transcript_317561.p1 ORF type:complete len:413 (+),score=55.83,RVT_3|PF13456.2|5.7e+03,RVT_3|PF13456.2|7.4e-20,zf-RVT|PF13966.2|1.2e-18,zf-RVT|PF13966.2|7.9e+03 S_Transcript_317561:275-1513(+)
ATGAGAGCTCATTTGGCACCAAATTTGCGGGTATGTGATTTGATTGATAAAGAGGCCGGGGACTGGAATATGGAAGCACTGCAAACCCACTTTGTACCAGCTGATGTGGAGATAATAAGAAGTATACCCCTGTGTAATTTCTGGCCATCTGATAAGTTGGTTTGGCACTATACTAATACTGGGTGTTTCACGGTTCGGTCAGCATATCACTTGAAAATGGAGCACCGAAACACCAGCAGACCAGGTGCGAGCTCATCCAATCATCGGGCCTTCTGGAAACATCTCTGGCAACTGAATGTCCCACCAAGAATCAAGAATTTCGGATGGCGAGCTGCTTCCAATGCCCTTCCAACAGGGGCGGCCATAGCTAGAAGATTAAATTCGGCTGAATTTGGGTGTCAAGTGTGTGGCGCACATGAAGATACGACACTACATGCTCTCATGGAGTGCCCATGGTCAAGACAGGCGTGGGATAAGAGTGGATGGGACAAGGCTGTCTGGACAAAAAGTTATGTGTGTATGCGAGATTGGTGGGAGGACGTGTGGGCCGCGCCTGCTACGAAGGATTTTGGACTCTTCCTCGCTGCAGTTTGGGGAATTTGGTCCGAGCGGTGCAGGATGCTATATGACAGTGAGCATGAACATGAGGAAATGATGTGTGGTAATGCGGAGAAATTTGTCATGAAATTTAGAGAGGTCAAAGTCCAAACTGATGTAGAGCACTTGAGCTTGAAGGCTGGGTGGGCACCCCCAACAGGTGGCATGTGGAAATTAAATGTTGATGCAGGGAAGCTAGGGGACTGGGGCTGTGGATGGGGCATGGCGGTTCGTGATGGTGAGGGTGAGCTGGTGATGATGGGGGTTCATCAAGAAAAGGGTCACTATGTCGCTGAGTTGGAGGAGGCCCGAGCACTGCTATTTGGGCTGCGCCTAGCTTGGGAGGCGGGGTACCGATCACTCATTGCTGAGAGTGATTGTCTTAGTGTAAGTTCAAAGCTTAAATGTAAGAAGGAGCTGCGATCTCTGCTAGGATACATTCTTGATAAAATTCTAGGATGGGCTAGTAAATTTGTTTTTCTTTCTTGGTCTCATGTATGTAGGGAGGGCAATAGTGTAGTCCATAACATAGCTAGGATCCAGCCCTATGAGTTGGAAGATAGAATTTGGCTTGAGGATATGCCTAGGCATATTGTTGAGCTTGGGCAAATGGACTTGTGTACTTTCCTAGCAAACAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_317561.p1 GENE.S_Transcript_317561~~S_Transcript_317561.p1 ORF type:complete len:413 (+),score=55.83,RVT_3|PF13456.2|5.7e+03,RVT_3|PF13456.2|7.4e-20,zf-RVT|PF13966.2|1.2e-18,zf-RVT|PF13966.2|7.9e+03 S_Transcript_317561:275-1513(+)
MRAHLAPNLRVCDLIDKEAGDWNMEALQTHFVPADVEIIRSIPLCNFWPSDKLVWHYTNTGCFTVRSAYHLKMEHRNTSRPGASSSNHRAFWKHLWQLNVPPRIKNFGWRAASNALPTGAAIARRLNSAEFGCQVCGAHEDTTLHALMECPWSRQAWDKSGWDKAVWTKSYVCMRDWWEDVWAAPATKDFGLFLAAVWGIWSERCRMLYDSEHEHEEMMCGNAEKFVMKFREVKVQTDVEHLSLKAGWAPPTGGMWKLNVDAGKLGDWGCGWGMAVRDGEGELVMMGVHQEKGHYVAELEEARALLFGLRLAWEAGYRSLIAESDCLSVSSKLKCKKELRSLLGYILDKILGWASKFVFLSWSHVCREGNSVVHNIARIQPYELEDRIWLEDMPRHIVELGQMDLCTFLANN*

Click here to download the sequence:
Link to NCBI Protein BLAST