Transcript Information: S_Transcript_317573.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeOrtholog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6.6E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29460886976215
Replicate 20.56988755314614
Replicate 30.47638063684577
Condition 2: 8 Hour
Replicate 10.47214886310996
Replicate 21.2382942051509
Replicate 30.94387517070028
Condition 3: 24 Hour
Replicate 10.72547583548099
Replicate 20.16726060203946
Replicate 30.093070274557624


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_317573.p1 GENE.S_Transcript_317573~~S_Transcript_317573.p1 ORF type:complete len:271 (+),score=26.57,RVT_1|PF00078.23|6.3e-29 S_Transcript_317573:1651-2463(+)
ATGGTAGAAGAGGATAAAGATCTTGCTCGGGTTGTGACCGAATACTTCGAAGAGATTTTCAAGACAAAGCATCCAACCAACATTTCAAGAGTCCTCCAGCATGTTCCAGCGAAGGTTAGCGAAGAGATGAATGAGTTTCTTTGTAAGCCTTTCACTCCAGAGGAGATTTACGAAGCATTAAAGCATATGCATCCTAGCAAAGCTCCTAGACCTGATGGTATGAATGCTCTTTTCTTTCAAAAATACAGGAACTTTGTGGGTGACTCTGTTATTAGTCTTGTCCTTCGTATTCTTAATGGTCTTGATTTTTCTGTGGAAATTAACCATACTCATGTATGCCTTATTCCCAAGAAACATAACCCTTTGTCCATTAGTGACTATAGCCCCATAAGCTTATGCAATGTAGGGTTCAAGATAGCCACAAAAAACATTGCAAATAGATTGAAGCAAATCCTCCCTGAAATTATTTCCCCGGCCCAAAGTTCTTTCACTCCGGGTCGGCTTATCAGTGATAACATCATTGTGGCCTTTGAGGTGTTTCATTCTATGCATTGTAACAGCAACATTAATGGCAGTATGGCGTTGAAATTAGATATGAAAAAAGCTTATGATAGGGTAGAATGGAGTTTCTTGGAACAAATCTTATTGAAATTGGGATTCAGGCATAGTTGGGTCAATGCAGTGATGAACTGTATTCGGACAGTGTATTATTCCTTCATTATTAATGGCGAACCCAGTGGTTTTGTTAGGCCAACGAGGGGCCTTCGTCAAGGAGACCCCCTCTCTCCCTATTTGTTTCTTTTTTTGTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_317573.p1 GENE.S_Transcript_317573~~S_Transcript_317573.p1 ORF type:complete len:271 (+),score=26.57,RVT_1|PF00078.23|6.3e-29 S_Transcript_317573:1651-2463(+)
MVEEDKDLARVVTEYFEEIFKTKHPTNISRVLQHVPAKVSEEMNEFLCKPFTPEEIYEALKHMHPSKAPRPDGMNALFFQKYRNFVGDSVISLVLRILNGLDFSVEINHTHVCLIPKKHNPLSISDYSPISLCNVGFKIATKNIANRLKQILPEIISPAQSSFTPGRLISDNIIVAFEVFHSMHCNSNINGSMALKLDMKKAYDRVEWSFLEQILLKLGFRHSWVNAVMNCIRTVYYSFIINGEPSGFVRPTRGLRQGDPLSPYLFLFLC*

Click here to download the sequence:
Link to NCBI Protein BLAST