Transcript Information: S_Transcript_317609.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46283480409009
Replicate 20
Replicate 30.16037161811827
Condition 2: 8 Hour
Replicate 10
Replicate 20.58361344277548
Replicate 30.37071039313011
Condition 3: 24 Hour
Replicate 10.37991101722773
Replicate 20.39415324480604
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_317609.p2 GENE.S_Transcript_317609~~S_Transcript_317609.p2 ORF type:complete len:115 (+),score=8.14,RVT_1|PF00078.23|8e-19 S_Transcript_317609:3265-3609(+)
ATGTTGTTTGATAATGTTATGCTGACTCATGAACTAACTCAGCATCATAATATGATCAACATCTCCGGTAGGACCATTATGAAATTAGATATCCAGAAAGCTTATGATACTGTAAATTGGAATTCTATCAAAGTTGTTTTACATACATTTGGTATCCTTGATGAATTCACCTCTTGGATTATGTCCTGCATTACCTCCTCTAGATTTTCTATAAGTATTAATGGGTGGTATAAGGGGTATTTTGAAGGAAAGTATGGCCTAAGACATGGAGACCCCTTCTCCCCCTATCTTTTTGTTCCCTGTATGGATGCTTTATCAAGAATGCTTAGGATATTGAAGAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_317609.p2 GENE.S_Transcript_317609~~S_Transcript_317609.p2 ORF type:complete len:115 (+),score=8.14,RVT_1|PF00078.23|8e-19 S_Transcript_317609:3265-3609(+)
MLFDNVMLTHELTQHHNMINISGRTIMKLDIQKAYDTVNWNSIKVVLHTFGILDEFTSWIMSCITSSRFSISINGWYKGYFEGKYGLRHGDPFSPYLFVPCMDALSRMLRILKK*

Click here to download the sequence:
Link to NCBI Protein BLAST