Transcript Information: S_Transcript_31783.p1


Annotated TAIR IDAT5G60960.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24528423-24529988 | Reverse length=521
E-Value2.5E-194
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.820541273644
Replicate 216.663620986222
Replicate 315.423062745969
Condition 2: 8 Hour
Replicate 118.960074137592
Replicate 218.354368778367
Replicate 316.699915817283
Condition 3: 24 Hour
Replicate 113.614592879701
Replicate 212.050125169114
Replicate 311.234466962138


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31783.p1 GENE.S_Transcript_31783~~S_Transcript_31783.p1 ORF type:5prime_partial len:568 (+),score=126.25,PPR_2|PF13041.2|4.8e+03,PPR_2|PF13041.2|9,PPR_2|PF13041.2|3.4e+03,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|0.0009,PPR_2|PF13041.2|8.9e-11,PPR_2|PF13041.2|6.2e-08,PPR_2|PF13041.2|3.3,PPR|PF01535.16|13,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.06,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|32,PPR|PF01535.16|0.25,PPR|PF01535.16|0.6,PPR_1|PF12854.3|27,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|2.7e-05,PPR_1|PF12854.3|6.8e+02,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|17,PPR_1|PF12854.3|96,PPR_1|PF12854.3|3.2,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|86,PPR_3|PF13812.2|2,PPR_3|PF13812.2|17,PPR_3|PF13812.2|89,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|38,PPR_3|PF13812.2|7.2 S_Transcript_31783:2-1705(+)
AATTTTCAATTTTCCATTCGAAAACAGAACCAAAGTTTCAAAATTAAAAAAAAAAAAAAAAAACACCGTCTTCCTCAACCACTTTGCCTAGGTATTCCATTTCCTAAACCCCTCACTCCACACTCACCCAAAATGCTGAGAGCTTCTTCCTCTCTCCGCCGCTTGCTCCTCCTCCGCCACCACCACTTCTATTCCACCACCACCATCACCACCTCTTCTCCACCACCAACACTCTCTTCTTTCACCTCCCTTAAACCCCATTTCTTCTCATCCCCAAAACCCCACCTTTCCCAAACCCTTTTCTCCCATTCCTTCTGTTCAAAACCCCATCAAGAAAATGACACCCAAATTGCCCAATATCTCTCTTATGAACTTCTCAAACCCCCCTCATCAAACTCTCAATCTGAAACCCTTTCCCTTTCTCAAAGACTTGACCTTTCTTTCTCCCATGTAACTCTAACCCCACCTCTAATTCTCCATACCCTTAACCTCTCTCCTGATGCTGGGCGCTCTGTGCTTGATTTCCTCAACTGGGTTTCCTCCGAAACCCCAAAAAGATTGGATCTTGATGATCAGGTATACTCTTACTTTCTCGATTATTTTGGCCGTAGGAAGGATTTCAAAGTTGCCCATGATGTTCTTGTTCTTGGTAAAGGTGTTCTTGAGGAGAAATCTTTTATTGTGTTTGTTGATAGGCTTGTTAGGGCTGGTAGACCTGCTCAAGCTGTCACCTTCTTTGAGAATATGGAGAAAGATTATGGCATTGTTAGGACTAGGGAAAGGTCGAATTTTGTTGTTACTAAGCTTTGTGAAAATGGGTATGCCAATTATGCTGAGAAGATGGTTAAGAGTCTTGCTAATGAGTTTTTCCCTGATGAGTATGTTTGTGATATGTTGATTAAAGGGTGGTGTGTTGATGGGAAGCTCGAGGAGGCGAGACGGTTGGCTAGGGAGATGTATAGGGGAGGGTTTGAGATTGGGTCGACGGCGTATAATGCCATTCTTGATTGTGTGTGTAGGCTTTGTAGGAAGAAGGACCCTTTTCGGCTGTGGTCCGAGGCCGAGAATGTGCTAGTTGATATGGATGCGGCGGGTGTGCCTCGGGATACCGAGACCTTCAATGTGTTGATTACGAATTTGTGTAAGCTTCGTATGACCGAGGAGGCTTTGAAGTTGTTCTTTAGGATGAATGAGTGGGGGTGTTCTCCTGATGCCATGACGTTTCTTGTTTTGACTAGGAGCTTGTATCAGGCAGCTAGGGTTGGGGAGGGCGACGAGATGATTGATAGGATGAAGTCTGCAGGGTTCGGGGATGCTCTTGATAAGAAGGCTTATTATGAGTTTTTGAAGATCCTTTGTGGGATTGAAAGGGTTGATCATGCTTTGAGTATCTTTGCAAAGATGAAGAAGGATGGTTGTAAACCTGGGGAGAAGACTTATGAGCTATTGATAAAGAAGTTGTATGCTCACGGTCGTGTGGAGAGAGCAAAGAGTCTTTACAATGAAGCTGCCCAAAATGGGGTGTCAGTTGAAGCTAAGGTTTACCCGTTGGATCCGAGATTTGTGAAGAAGCCCACTGTTGTGAAGAAGGGGAAGAAGCGGCTGACATTGCCCGAGAAAATGGCATTGAAAAGAAAACGGCTCAGGAAGATTAATTTGAGTTTTGTGAAGAAGCCAAGGAATATGATGCGACGAGCACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31783.p1 GENE.S_Transcript_31783~~S_Transcript_31783.p1 ORF type:5prime_partial len:568 (+),score=126.25,PPR_2|PF13041.2|4.8e+03,PPR_2|PF13041.2|9,PPR_2|PF13041.2|3.4e+03,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|0.0009,PPR_2|PF13041.2|8.9e-11,PPR_2|PF13041.2|6.2e-08,PPR_2|PF13041.2|3.3,PPR|PF01535.16|13,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.06,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|32,PPR|PF01535.16|0.25,PPR|PF01535.16|0.6,PPR_1|PF12854.3|27,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|2.7e-05,PPR_1|PF12854.3|6.8e+02,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|17,PPR_1|PF12854.3|96,PPR_1|PF12854.3|3.2,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|86,PPR_3|PF13812.2|2,PPR_3|PF13812.2|17,PPR_3|PF13812.2|89,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|38,PPR_3|PF13812.2|7.2 S_Transcript_31783:2-1705(+)
NFQFSIRKQNQSFKIKKKKKKHRLPQPLCLGIPFPKPLTPHSPKMLRASSSLRRLLLLRHHHFYSTTTITTSSPPPTLSSFTSLKPHFFSSPKPHLSQTLFSHSFCSKPHQENDTQIAQYLSYELLKPPSSNSQSETLSLSQRLDLSFSHVTLTPPLILHTLNLSPDAGRSVLDFLNWVSSETPKRLDLDDQVYSYFLDYFGRRKDFKVAHDVLVLGKGVLEEKSFIVFVDRLVRAGRPAQAVTFFENMEKDYGIVRTRERSNFVVTKLCENGYANYAEKMVKSLANEFFPDEYVCDMLIKGWCVDGKLEEARRLAREMYRGGFEIGSTAYNAILDCVCRLCRKKDPFRLWSEAENVLVDMDAAGVPRDTETFNVLITNLCKLRMTEEALKLFFRMNEWGCSPDAMTFLVLTRSLYQAARVGEGDEMIDRMKSAGFGDALDKKAYYEFLKILCGIERVDHALSIFAKMKKDGCKPGEKTYELLIKKLYAHGRVERAKSLYNEAAQNGVSVEAKVYPLDPRFVKKPTVVKKGKKRLTLPEKMALKRKRLRKINLSFVKKPRNMMRRAL*

Click here to download the sequence:
Link to NCBI Protein BLAST