Transcript Information: S_Transcript_317938.p1


Annotated TAIR IDAT4G19490.1
Annotated Gene NameVPS54
Annotated Gene Symbol(s)ATVPS54, VPS54
Annotation TypeHomolog
Chromosome Positionchr4:10616017-10622934 | Forward length=1034
E-Value6E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4193637486528
Replicate 20.40114162831845
Replicate 30.83830618561821
Condition 2: 8 Hour
Replicate 12.5202734011157
Replicate 24.881130612304
Replicate 32.3253651932707
Condition 3: 24 Hour
Replicate 10.79435939965797
Replicate 21.2362079041644
Replicate 31.1464565638689


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_317938.p1 GENE.S_Transcript_317938~~S_Transcript_317938.p1 ORF type:5prime_partial len:110 (+),score=18.41 S_Transcript_317938:1-330(+)
GTAGACCAAAACTCTATTCTTTCTCTCTTATTGCGCTCCAACTTCATCTCTTCATCACCGGCGACCCAAGTCCATGGTAGTAATGATTGTTCTTCGGTCAAAGAATTCTCTAAGGCAAAACTACCATCAGTCCTGATGATATATCGTGATACACTTACTGCTGATATGAAAACGGCTATAAAAACTGGAGTAGCAGAGCTGCTGCCAGTTCTTGTTGCTCGACCACTGGAGTCGGATTTCTCGACTGGAGAGAGGGTGAGTGATGCAGAAGGTGAGATGTTCTCCAAACATTCCCCTTTCATGGTAGTTGTGGTTTATCCACTCTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_317938.p1 GENE.S_Transcript_317938~~S_Transcript_317938.p1 ORF type:5prime_partial len:110 (+),score=18.41 S_Transcript_317938:1-330(+)
VDQNSILSLLLRSNFISSSPATQVHGSNDCSSVKEFSKAKLPSVLMIYRDTLTADMKTAIKTGVAELLPVLVARPLESDFSTGERVSDAEGEMFSKHSPFMVVVVYPLL*

Click here to download the sequence:
Link to NCBI Protein BLAST