Transcript Information: S_Transcript_318434.p6


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89305373272418
Replicate 21.0365068919638
Replicate 30.49510700895572
Condition 2: 8 Hour
Replicate 11.2881108245248
Replicate 20.9008798109957
Replicate 30.57223751959682
Condition 3: 24 Hour
Replicate 10.87965973787628
Replicate 21.2168489436965
Replicate 31.0156527948369


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_318434.p6 GENE.S_Transcript_318434~~S_Transcript_318434.p6 ORF type:complete len:149 (+),score=16.13,zf-RVT|PF13966.2|1.1e-06,zf-RVT|PF13966.2|1.8e+03 S_Transcript_318434:4429-4875(+)
ATGTTGGGAAATGCAAAAACTCGAGACTCTCTTCACAAAATTGGCATATATATTGATGCTTTCTGCCCTTTTTGTGCTGGAGATACAGAATCCCTTTCTCATTTATTCTTTAAGTGCCCTTTTAGTGCATGCATGATCAAGTCATTCTGTGATTGGTTTGGTATTTTGAAGTATGATTGGACAATATTCTCTTTTCCTCGATGGTCCCTCAGACAATCTGGTATTTCTAAGATCGGTAAGAAGGTGCTAAGTGTATGCTTTATTGGACTCCTGTATCATATCTGGAAGGCTCGTAATATTGCTGTGTGGGAGAAGAGAGTTCTAGTACCTGCTCAGGTGTTCAAAAGATTACAAAGGCAGATGCAAATCCGCTCCACCTCATGTCTGCCTATGACTGTTTCTAGGAATGGTAGAGCTTGGGTCACTCAAGTGTTTAGCTCCTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_318434.p6 GENE.S_Transcript_318434~~S_Transcript_318434.p6 ORF type:complete len:149 (+),score=16.13,zf-RVT|PF13966.2|1.1e-06,zf-RVT|PF13966.2|1.8e+03 S_Transcript_318434:4429-4875(+)
MLGNAKTRDSLHKIGIYIDAFCPFCAGDTESLSHLFFKCPFSACMIKSFCDWFGILKYDWTIFSFPRWSLRQSGISKIGKKVLSVCFIGLLYHIWKARNIAVWEKRVLVPAQVFKRLQRQMQIRSTSCLPMTVSRNGRAWVTQVFSSC*

Click here to download the sequence:
Link to NCBI Protein BLAST