Transcript Information: S_Transcript_31890.p1


Annotated TAIR IDAT1G21410.1
Annotated Gene NameF-box/RNI-like superfamily protein
Annotated Gene Symbol(s)SKP2A
Annotation TypeOrtholog
Chromosome Positionchr1:7497479-7499386 | Forward length=360
E-Value1.8E-187
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1411.18861108436
Replicate 2328.00013808839
Replicate 3274.37873229442
Condition 2: 8 Hour
Replicate 1342.28673151686
Replicate 2330.02951113325
Replicate 3300.07029201786
Condition 3: 24 Hour
Replicate 1245.30347834371
Replicate 2223.7371478817
Replicate 3226.12403544


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31890.p1 GENE.S_Transcript_31890~~S_Transcript_31890.p1 ORF type:complete len:375 (+),score=57.55,LRR_4|PF12799.3|7e+02,LRR_4|PF12799.3|3.9,LRR_4|PF12799.3|0.00052,LRR_4|PF12799.3|0.02,LRR_4|PF12799.3|16,LRR_4|PF12799.3|0.0074,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|4.4e+03,LRR_4|PF12799.3|1.1e+04,LRR_6|PF13516.2|7.4e+03,LRR_6|PF13516.2|6.3e+02,LRR_6|PF13516.2|1.6e+02,LRR_6|PF13516.2|0.47,LRR_6|PF13516.2|3.3,LRR_6|PF13516.2|28,LRR_6|PF13516.2|1.1,LRR_6|PF13516.2|1.8e+02,LRR_6|PF13516.2|1.6e+04,F-box-like|PF12937.3|9.5e-06 S_Transcript_31890:173-1297(+)
ATGGCAAGGCATGAAGGATTAAGAAGTGAGGACTTGGACTCCTGCTTCAAGAAGCTAGTGGTGTTTGGTGCTGCTACTTTAGCTGCTGGTGGTGGTGAAGGTGGAAAAATCGACGGTGGCGATATGATGGCCAAGTGGAATGATATTCCTATGGAGCTTCTATTGAGGATTCTGTCCCTTGTTGATGATCAAACAGTGATCAAGGCTTCTTGGGTGTGTAGTGGCTGGAGGGAAGCTATTTGCCTCGGCCTTACTCGCCTTTGTCTATCATGGTGCAAGAATGACATGAACAACCTAGTTCTGGCCCTTGCACCAAAATTCACACGTTTGCAGAGTCTTATACTTCGCCAAGACAAACCACAACTCGAAGATAATGCTGTTGAGATGATAGCAAACTTCTGTCATGACCTACAGGAACTTGACTTGAGCAAAAGCTTCAAGCTAACAGATCGTTCTCTGAATGCCTTGGCTCACGGTTGCCCGAACCTTACCAAGCTTAACATCAGTGGGTGTACAGCTTTTAATGATGCTGGGCTTGCATATTTGACTAGCTTTTGCAAAAAGTTGAAGTCGTTGAATCTTTGTGGATGTGTGAGGGCTGCAACTGATAGGGCATTACAGGCCATTGCATATAACTGCAGTGAGCTGCAAAATCTCAACTTGGGGTGGTGTGAGAACGTTAGCGATTTGGGTGTGACAAGTCTGGCATATGGTTGCCCGAATCTCAGAGCCCTTGACTTGTGTGGATGTGTTCTTATAACAGATGAAAGTGTGATTGCGTTAGCAAATAGATGCCCTCGTCTCAGATCTCTTGGGCTCTACTACTGCCAGAACATCACTGACAGAGCTATGTACTCGCTGGCACATAGCCGCGTGAAGAACAAGCATGGTGTGTGGCAGCCAGTGAAAAGCCGATATGAAGACGATGGCCTCATGAACCTCAACATCAGTCAGTGCACTGCACTGACCCCTCCAGCCGTTCAGGCTGTGTGCGACTCATTTCCGGCACTTCACACTTGTCCTGGAAGGCATTCTCTCATCATAAGCGGTTGCCTGAATCTAACATCAGTTCATTGTGCCTGTGCTGTTCATGCACACCGTGCAACAAGCACAGCCGCTCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31890.p1 GENE.S_Transcript_31890~~S_Transcript_31890.p1 ORF type:complete len:375 (+),score=57.55,LRR_4|PF12799.3|7e+02,LRR_4|PF12799.3|3.9,LRR_4|PF12799.3|0.00052,LRR_4|PF12799.3|0.02,LRR_4|PF12799.3|16,LRR_4|PF12799.3|0.0074,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|4.4e+03,LRR_4|PF12799.3|1.1e+04,LRR_6|PF13516.2|7.4e+03,LRR_6|PF13516.2|6.3e+02,LRR_6|PF13516.2|1.6e+02,LRR_6|PF13516.2|0.47,LRR_6|PF13516.2|3.3,LRR_6|PF13516.2|28,LRR_6|PF13516.2|1.1,LRR_6|PF13516.2|1.8e+02,LRR_6|PF13516.2|1.6e+04,F-box-like|PF12937.3|9.5e-06 S_Transcript_31890:173-1297(+)
MARHEGLRSEDLDSCFKKLVVFGAATLAAGGGEGGKIDGGDMMAKWNDIPMELLLRILSLVDDQTVIKASWVCSGWREAICLGLTRLCLSWCKNDMNNLVLALAPKFTRLQSLILRQDKPQLEDNAVEMIANFCHDLQELDLSKSFKLTDRSLNALAHGCPNLTKLNISGCTAFNDAGLAYLTSFCKKLKSLNLCGCVRAATDRALQAIAYNCSELQNLNLGWCENVSDLGVTSLAYGCPNLRALDLCGCVLITDESVIALANRCPRLRSLGLYYCQNITDRAMYSLAHSRVKNKHGVWQPVKSRYEDDGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLNLTSVHCACAVHAHRATSTAAH*

Click here to download the sequence:
Link to NCBI Protein BLAST