Transcript Information: S_Transcript_319150.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value8E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35802243814144
Replicate 20.39574510417067
Replicate 30.2894599833749
Condition 2: 8 Hour
Replicate 10.095629552991628
Replicate 20.30096657362861
Replicate 30.19117352112091
Condition 3: 24 Hour
Replicate 10.097959118791902
Replicate 20.1524471630696
Replicate 30.1696550072093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_319150.p1 GENE.S_Transcript_319150~~S_Transcript_319150.p1 ORF type:complete len:446 (+),score=65.40,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|9.2e-15,RVT_1|PF00078.23|5.7e-09 S_Transcript_319150:455-1792(+)
ATGTGTAGGGATGCTGATTTGAATTTCCATCCTAAGTGTAGCAGGCAACAACTTACTCACCTTCTTTTTGCTGATGACTTAATGATGTTTTCAAGAGGTGATCAAGTCTCTATTCAGCTGCTACACAGTGCATTTGAGAAATTTTCTAAAGCTTCAGGGCTAAAAGCTAATATGAGTAAGAGCTCCCTCTTCTGTGGGGGGATGCAAAAGAGTGACGAGGTGAACATGCTAAAGTATTTGAACTTGCAAGAAGGAAGACTTCCTATTAGGTACCTGGGGGTGCCCCTAGCCCACAAGAAACTATCCATAAGTGAATGCATCCCATTGGTGGACAGAATCACCTCTAGAATCACTACTTGGACTGCCAAGTTCTTGTCATATGTTGGAAGAGTACAGTTGGTTCAATCTGTATTGTTTGGCATTCAAGCCTATTGGGCTCAGATTATCATCACCCCCAAGAAGATGCTGAAGAGAGTGGAGGCTTTATGTAGAAGTTTTATATGGACTGGCAATGCTGTGATTTCTAAGAAGGCACTAGTTGCTTGGGATAAGGTGACCAATCCCAAGAAAAGTGGAGGGTTAGGTTTGAAAAAATTGGTGATCTGGAATAGAGCTGCTATCTGTAAGCTTTGTTGGGAGTACACAAATAAGAAAGATAAAGTTTGGATCAAATGGATGCATGAGTATTATCCTGTCTTGGCAAATGATAGAAGTATTCCCCTAAATATGTCCTGGATGCTCAGGAAGATAGTTCAATTGAGGCAGGAAGATAGAGCACTGAATATAAATGCTCATGATAAAGTAACAATTGGCAGCATTTATAATCAGTTCATTGAGGAGGTCCCAGCAGTCAATTGGCATAAGCTAGTATGGAAAAATCTTGCAAGGCCCAGAGCTAAACTGATCTGGTGGTTAGTTTTACTTCAGAAACTAATGACTAAGGATAAGGTCAAGAAGTGGAGCCCCAATTGTGACACTTTGTGTATTCTATGCAAACAAGAGGAGGAAACCTGTGAACATCTGTTTGGGACATGCTGTGTTAGTCAAGAGATCTTCACTAAGCTATTAAAAAATATTAAAGTAAGGTGGCATCCTACTACTACTTGGCAACACACTGTGGAGGAATGGCTGAGAATAGGATCTGGTAGAAGACCTGCTGCTCAGTGTGCTAGAGGCTTACTGGCTGAGGCATGCTATGCCATCTGGAGAGAAAGAAACCTCTGGGTCTTCCAACAACAAGAAAGGACAATAGAGCAAATCACTAAGAGTGTAATGCTTTTAGTCTGTGTCAAGGCTCAAACCACGGAGAAAGTTGCTAAATTTCTTGATAGCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_319150.p1 GENE.S_Transcript_319150~~S_Transcript_319150.p1 ORF type:complete len:446 (+),score=65.40,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|9.2e-15,RVT_1|PF00078.23|5.7e-09 S_Transcript_319150:455-1792(+)
MCRDADLNFHPKCSRQQLTHLLFADDLMMFSRGDQVSIQLLHSAFEKFSKASGLKANMSKSSLFCGGMQKSDEVNMLKYLNLQEGRLPIRYLGVPLAHKKLSISECIPLVDRITSRITTWTAKFLSYVGRVQLVQSVLFGIQAYWAQIIITPKKMLKRVEALCRSFIWTGNAVISKKALVAWDKVTNPKKSGGLGLKKLVIWNRAAICKLCWEYTNKKDKVWIKWMHEYYPVLANDRSIPLNMSWMLRKIVQLRQEDRALNINAHDKVTIGSIYNQFIEEVPAVNWHKLVWKNLARPRAKLIWWLVLLQKLMTKDKVKKWSPNCDTLCILCKQEEETCEHLFGTCCVSQEIFTKLLKNIKVRWHPTTTWQHTVEEWLRIGSGRRPAAQCARGLLAEACYAIWRERNLWVFQQQERTIEQITKSVMLLVCVKAQTTEKVAKFLDSL*

Click here to download the sequence:
Link to NCBI Protein BLAST