Transcript Information: S_Transcript_31920.p1


Annotated TAIR IDAT5G39040.1
Annotated Gene Nametransporter associated with antigen processing protein 2
Annotated Gene Symbol(s)ALS1, ATTAP2, TAP2
Annotation TypeOrtholog
Chromosome Positionchr5:15625660-15629621 | Forward length=644
E-Value4.7E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.834025679735
Replicate 21.005711204901
Replicate 30.47289066881027
Condition 2: 8 Hour
Replicate 10.30378048884805
Replicate 20.63737460512042
Replicate 31.3967649427766
Condition 3: 24 Hour
Replicate 11.9915563296268
Replicate 20.83940042875361
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31920.p1 GENE.S_Transcript_31920~~S_Transcript_31920.p1 ORF type:5prime_partial len:351 (+),score=83.58,ABC_membrane|PF00664.19|3.5e-51 S_Transcript_31920:3-1055(+)
CATTTTAGTTGCAAAGGGGTTTCCTATATTGAAAAAACCCACAAAAAAAGAATGAATTTTGGAGGGCGTGGTGGTGGTGGTGGTTATGGTCATGGTCATGGTGGTGGTGGAGATAGAACTCCTCTTTTGTCAAGACATGCTGGTGGAAAGAGGAATGATGTTTCTGCAGAAGGTGGATCAGACCTCGAGCGTGGGGATTTACCAGCTGCAAATGTGGGCTTCTGTAGGGTTCTTTCCCTTGCAAAGCCTGAAGCAGGAAGACTGGTGATTGCCACAGTTGCTTTGTTGATTGCGGCCACATCAAACATCTTGATTCCAAAGTTTGGCGGAAAAATAATTGATATTGTATCGAGTGATATCAGTACACCTGAGCAGAAAGCTGAAGCCATAGAAGCAGTCAAGAGCACCATACTGGAGATCATTCTAATTATTGTCGTGGGTTCGGTGACAACAGGTCTTCGTGCCTGGCTGTTTAATTCTGCAAGTGAAAGGGTCGTTGCAAGACTAAGAAAGAACTTATTCTCTCATCTGGTTCATCAGGAAATAGCCTTTTATGATGTAACTCGAACTGGAGAACTCTTGAGTAGGCTTTCTGAAGATACTCAGATCATAAAAAATGCTGCCACTACCAATCTTTCTGAAGCGCTGAGAAATTTAGCAACAGCATTTATTGGTCTTGGCTTCATGTTTGCCACATCATGGAAGCTAACTTTGTTGTCTTTGGTTGTTGTGCCTCCAATTTCTGTTGGTGTACGTAAATTTGGTCGCTTCCTTCGTGACCTTGCGCACAAGACTCAGGCAGCAGCTGCTGCAGCTTCTTCAATAGCTGAGGACTCTTTTGGTGCTATTCGGACAGTAAGGTCATTTGCCCAAGAAAAATATGAGATTCAACGCTACTCTGATCAAGTAGAGGAGACACTATACTTGGGACTTAAACAAGCTGTGGGTTTCTCTTGTGGATTTTTTCTTTTTTTTTGGTCCCTGTTTGTAGAAGCTTATGAAACTGATTTTGGTGGGTATAGAAAGTTTCAGGAATGTTCTTTGGAGGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31920.p1 GENE.S_Transcript_31920~~S_Transcript_31920.p1 ORF type:5prime_partial len:351 (+),score=83.58,ABC_membrane|PF00664.19|3.5e-51 S_Transcript_31920:3-1055(+)
HFSCKGVSYIEKTHKKRMNFGGRGGGGGYGHGHGGGGDRTPLLSRHAGGKRNDVSAEGGSDLERGDLPAANVGFCRVLSLAKPEAGRLVIATVALLIAATSNILIPKFGGKIIDIVSSDISTPEQKAEAIEAVKSTILEIILIIVVGSVTTGLRAWLFNSASERVVARLRKNLFSHLVHQEIAFYDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLATAFIGLGFMFATSWKLTLLSLVVVPPISVGVRKFGRFLRDLAHKTQAAAAAASSIAEDSFGAIRTVRSFAQEKYEIQRYSDQVEETLYLGLKQAVGFSCGFFLFFWSLFVEAYETDFGGYRKFQECSLED*

Click here to download the sequence:
Link to NCBI Protein BLAST