Transcript Information: S_Transcript_31921.p1


Annotated TAIR IDAT5G39040.1
Annotated Gene Nametransporter associated with antigen processing protein 2
Annotated Gene Symbol(s)ALS1, ATTAP2, TAP2
Annotation TypeOrtholog
Chromosome Positionchr5:15625660-15629621 | Forward length=644
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 149.68832254786
Replicate 260.389387731445
Replicate 361.401495964132
Condition 2: 8 Hour
Replicate 129.346571871463
Replicate 228.69138896545
Replicate 326.886303247975
Condition 3: 24 Hour
Replicate 159.82594224841
Replicate 265.903077468986
Replicate 364.007605136851


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_31921.p1 GENE.S_Transcript_31921~~S_Transcript_31921.p1 ORF type:5prime_partial len:662 (+),score=156.35,ABC_membrane|PF00664.19|2e-59,ABC_tran|PF00005.23|3.3e-35 S_Transcript_31921:3-1988(+)
CATTTTAGTTGCAAAGGGGTTTCCTATATTGAAAAAACCCACAAAAAAAGAATGAATTTTGGAGGGCGTGGTGGTGGTGGTGGTTATGGTCATGGTCATGGTGGTGGTGGAGATAGAACTCCTCTTTTGTCAAGACATGCTGGTGGAAAGAGGAATGATGTTTCTGCAGAAGGTGGATCAGACCTCGAGCGTGGGGATTTACCAGCTGCAAATGTGGGCTTCTGTAGGGTTCTTTCCCTTGCAAAGCCTGAAGCAGGAAGACTGGTGATTGCCACAGTTGCTTTGTTGATTGCGGCCACATCAAACATCTTGATTCCAAAGTTTGGCGGAAAAATAATTGATATTGTATCGAGTGATATCAGTACACCTGAGCAGAAAGCTGAAGCCATAGAAGCAGTCAAGAGCACCATACTGGAGATCATTCTAATTATTGTCGTGGGTTCGGTGACAACAGGTCTTCGTGCCTGGCTGTTTAATTCTGCAAGTGAAAGGGTCGTTGCAAGACTAAGAAAGAACTTATTCTCTCATCTGGTTCATCAGGAAATAGCCTTTTATGATGTAACTCGAACTGGAGAACTCTTGAGTAGGCTTTCTGAAGATACTCAGATCATAAAAAATGCTGCCACTACCAATCTTTCTGAAGCGCTGAGAAATTTAGCAACAGCATTTATTGGTCTTGGCTTCATGTTTGCCACATCATGGAAGCTAACTTTGTTGTCTTTGGTTGTTGTGCCTCCAATTTCTGTTGGTGTACGTAAATTTGGTCGCTTCCTTCGTGACCTTGCGCACAAGACTCAGGCAGCAGCTGCTGCAGCTTCTTCAATAGCTGAGGACTCTTTTGGTGCTATTCGGACAGTAAGGTCATTTGCCCAAGAAAAATATGAGATTCAACGCTACTCTGATCAAGTAGAGGAGACACTATACTTGGGACTTAAACAAGCTAAAGTTTCAGGAATGTTCTTTGGAGGACTAAATGCAGCATCTACCCTCTCGGTTATCGTGGTGGTGATATATGGTGCTATTCTAACAATCAATGGTGCTGGTGGCATGACACCTGGTGCTCTCACATCCTTCATTCTGTATAGCCTTACAGTTGGATCATCTATATCTGGACTTTCTGGATTATACACAGTAGCAATGAAAGCTGCAGGAGCTAGTAGACGTGTGTTCCAACTTCTAGACCGTAAATCGTCCATGGAGAAATCAGGATCCAAGTGTCCATTGAGTGATCAAGATGCAGAAGTGGAGTTGGATGATGTCTGGTTTGCATATCCCTCACGGCCAAACGATATGGTGCTCAAGGGAATTAACTTAAAATTGGAACCTGGTTCAAAGGTCGCTCTTGTTGGTCCTAGTGGTGGCGGAAAAACAACAATAGCAAACTTAATTGAGAGATTTTATGATCCTACCAAAGGGAAGATCTTGCTTGCTGGGGTACCTTTGGTAGAAATATCTCACACACATCTCCATAGCAAGATCAGCATAGTAAGCCAGGAGCCAACTCTTTTCAATTGCTCCATAGAAGAGAACATTGCTTATGGTCTAAGTGGCAAAGCCAGCAGTGAAGATATTGAGAATGCTGCTAAAATGGCAAATGCTCATGATTTTATATCCAAGTTTCCTGAGAAATATCAAACTCATGTTGGAGAAAGGGGAGTTCGGCTTTCAGGAGGTCAGAAACAGCGAATAGCAATTGCTCGAGCTCTGCTGATGAATCCTAGAGTACTACTTTTGGATGAGGCCACAAGCGCTCTTGATGCTGAGAGCGAATACCTAGTACAGGATGCCATGGACCACTTGATGAATGGAAGAACCGTGTTAGTGATAGCACATAGATTGTCAACTGTTAAAAGTGCAAATACAGTAGCCGTCATCTCTGATGGTCAGGTGGTGGAAAGTGGCACTCATGAAGAGCTTTTAGAGAAGGATGGAATCTACACTGCATTGGTGAGGAGGCAATTGCAAGGACCCAGAGCTGAAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_31921.p1 GENE.S_Transcript_31921~~S_Transcript_31921.p1 ORF type:5prime_partial len:662 (+),score=156.35,ABC_membrane|PF00664.19|2e-59,ABC_tran|PF00005.23|3.3e-35 S_Transcript_31921:3-1988(+)
HFSCKGVSYIEKTHKKRMNFGGRGGGGGYGHGHGGGGDRTPLLSRHAGGKRNDVSAEGGSDLERGDLPAANVGFCRVLSLAKPEAGRLVIATVALLIAATSNILIPKFGGKIIDIVSSDISTPEQKAEAIEAVKSTILEIILIIVVGSVTTGLRAWLFNSASERVVARLRKNLFSHLVHQEIAFYDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLATAFIGLGFMFATSWKLTLLSLVVVPPISVGVRKFGRFLRDLAHKTQAAAAAASSIAEDSFGAIRTVRSFAQEKYEIQRYSDQVEETLYLGLKQAKVSGMFFGGLNAASTLSVIVVVIYGAILTINGAGGMTPGALTSFILYSLTVGSSISGLSGLYTVAMKAAGASRRVFQLLDRKSSMEKSGSKCPLSDQDAEVELDDVWFAYPSRPNDMVLKGINLKLEPGSKVALVGPSGGGKTTIANLIERFYDPTKGKILLAGVPLVEISHTHLHSKISIVSQEPTLFNCSIEENIAYGLSGKASSEDIENAAKMANAHDFISKFPEKYQTHVGERGVRLSGGQKQRIAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDHLMNGRTVLVIAHRLSTVKSANTVAVISDGQVVESGTHEELLEKDGIYTALVRRQLQGPRAEN*

Click here to download the sequence:
Link to NCBI Protein BLAST