Transcript Information: S_Transcript_319235.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39720897365941
Replicate 20
Replicate 30.13763235883284
Condition 2: 8 Hour
Replicate 10.1591447038592
Replicate 20.16695409432632
Replicate 30
Condition 3: 24 Hour
Replicate 10.32604303717305
Replicate 20
Replicate 30.18822421197848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_319235.p1 GENE.S_Transcript_319235~~S_Transcript_319235.p1 ORF type:5prime_partial len:134 (-),score=16.64,RVT_2|PF07727.10|5.8e-14 S_Transcript_319235:5-406(-)
ATCTTAAGTGATATTTCTAAGGGAATTCAAACTAGATCTCGTGTTCAAAATTTCTGTGCTTTCTTTTCATTTTTATCCTTGTCGGAACCTTCTAATTATCTTGAAGCTTTGCAGAATAGTGCTTGGATCGTTGCCATGCAAGAGGAGCTTAATCAATTTGAAAGAAACAAAGTGTGGCACTTGGTTCCTAGACCCTTTGACCATAATGTCATAGGAACCAAATGGATTCTTCGAAACAAATTGGATGAAGAGGGCATTGTCATTAGAAACAAGGCTAGACTAGTGGCTCAAGGCTATTGTCAAGAGGAAGGCTATTCCGACTCAAATTTTGCAGGTTACTTGGTTGATCGGAAAAGCACTTCCGGGACGGCGCATTTCTTGGGTCCATGCTTGATCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_319235.p1 GENE.S_Transcript_319235~~S_Transcript_319235.p1 ORF type:5prime_partial len:134 (-),score=16.64,RVT_2|PF07727.10|5.8e-14 S_Transcript_319235:5-406(-)
ILSDISKGIQTRSRVQNFCAFFSFLSLSEPSNYLEALQNSAWIVAMQEELNQFERNKVWHLVPRPFDHNVIGTKWILRNKLDEEGIVIRNKARLVAQGYCQEEGYSDSNFAGYLVDRKSTSGTAHFLGPCLIS*

Click here to download the sequence:
Link to NCBI Protein BLAST