Transcript Information: S_Transcript_319260.p1


Annotated TAIR IDAT1G60000.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22093678-22094540 | Reverse length=258
E-Value4.7E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1114.9398724443
Replicate 2120.42911376411
Replicate 3144.84594053698
Condition 2: 8 Hour
Replicate 1145.02682385107
Replicate 2154.29886304343
Replicate 3150.13155123774
Condition 3: 24 Hour
Replicate 1138.97990659298
Replicate 2117.98735129613
Replicate 3130.88648957073


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_319260.p1 GENE.S_Transcript_319260~~S_Transcript_319260.p1 ORF type:complete len:301 (+),score=66.67,RRM_1|PF00076.18|2.3e-13,RRM_1|PF00076.18|1e-21,RRM_6|PF14259.2|4e-09,RRM_6|PF14259.2|1.7e-12,RRM_5|PF13893.2|0.00014,RRM_5|PF13893.2|2.3e-07 S_Transcript_319260:264-1166(+)
ATGGCGGCCACCGCAACGGCCACCATGGGCTCCTCTTTCTCGACTGCCAATTACACCTCCAGATCATACCCATCATCAACCAATAATAAGCTCTTATCAATACCAGAACCCCTCCTTGTCAAATTTGGATATGCTACTAAAACACCACATTCTCCTTTGGTATCTCATTCTCAACTGTATTATGGGACTGAACCACTTTCCATTGGGTCCCTGCCTCACATGTGGCGGGCCCCGTTGAGGCTAGCTGCCGTCATGGTGGCCTCAGAAGAGGCCGTGGTAAAGGGCACCACAGAGGAAGCAGAAGTAGAGGAGGAGTTAACACAGGTGGAGGCTGAAAATGGTGACAATGATCAGATTCAGGGTGAGGTTCCTGCAGTGAACACTAAGCTTTACTTTGGCAATTTGCCATATCATTGTGATAGTGCCCAACTTGCTGGTATAGTCCAGCAGTATGGCATTCCGGAATTGGTTGAGGTTCTTTATGACAGAGACACAGGAAGAAGCAGAGGATTTGCATTCGTGACGATGAGCTGTGTTGAGGATTGTAATGCAGTTATTGAGAATCTTGATGGAAGTGAATATGGTGGCAGATTCTTGAGAGTGAATTTCTCAGACAAGCCCAAGAAAAGAGAGCCATTATACCCAGAAACTGAGCACAAGCTTTTTGTGGGCAACTTGTCCTGGTCAATCACTTCAGAGAGCTTGTACCAAGCATTCCAAGAGTATGGAAATGTGGTTGGAGCTCGGGTTTTGTATGATGGAGAGACAGGAAAATCTCGAGGCTACGGTTTTGTGTGCTACTCCACCAGATCAGAGATGGAAAATGCTCTTGCTTCTCTTAATGGAGTGGAATTAGAAGGGCGAGCAATCCGAGTAAGCTTGGCCGAAGGGAAGAAGTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_319260.p1 GENE.S_Transcript_319260~~S_Transcript_319260.p1 ORF type:complete len:301 (+),score=66.67,RRM_1|PF00076.18|2.3e-13,RRM_1|PF00076.18|1e-21,RRM_6|PF14259.2|4e-09,RRM_6|PF14259.2|1.7e-12,RRM_5|PF13893.2|0.00014,RRM_5|PF13893.2|2.3e-07 S_Transcript_319260:264-1166(+)
MAATATATMGSSFSTANYTSRSYPSSTNNKLLSIPEPLLVKFGYATKTPHSPLVSHSQLYYGTEPLSIGSLPHMWRAPLRLAAVMVASEEAVVKGTTEEAEVEEELTQVEAENGDNDQIQGEVPAVNTKLYFGNLPYHCDSAQLAGIVQQYGIPELVEVLYDRDTGRSRGFAFVTMSCVEDCNAVIENLDGSEYGGRFLRVNFSDKPKKREPLYPETEHKLFVGNLSWSITSESLYQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTRSEMENALASLNGVELEGRAIRVSLAEGKKS*

Click here to download the sequence:
Link to NCBI Protein BLAST