Transcript Information: S_Transcript_319262.p1


Annotated TAIR IDAT1G60000.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22093678-22094540 | Reverse length=258
E-Value1.6E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1103.50492762273
Replicate 2107.8707529708
Replicate 3123.59108711057
Condition 2: 8 Hour
Replicate 1114.99967194508
Replicate 2111.63402324588
Replicate 3106.93688647465
Condition 3: 24 Hour
Replicate 1114.94220574917
Replicate 295.522642080176
Replicate 3108.16702265013


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_319262.p1 GENE.S_Transcript_319262~~S_Transcript_319262.p1 ORF type:complete len:298 (+),score=65.08,RRM_1|PF00076.18|1.4e-13,RRM_1|PF00076.18|1e-21,RRM_6|PF14259.2|2e-10,RRM_6|PF14259.2|1.7e-12,RRM_5|PF13893.2|4.7e+03,RRM_5|PF13893.2|0.00014,RRM_5|PF13893.2|2.3e-07 S_Transcript_319262:264-1157(+)
ATGGCGACCACCATCGGCTCCTCTTTCTCGACTGCCAAACACACCTTTAGATCATACCCATCCTCAACCAATAATAAGCTCTTATCAATACCAGAACCCCTCCTTGTCAAATTTGGATATGCTACTAAAACACCACAGTCTCCTCTGGTATCTCATTCTCAACTTTATTATGGGACTGAACCACTTTCCATTGGGTCCCTGCCCCATATGTGGCGGGCCCCCTTGAGGCTAGCCGCCGCCATGGTGGCCTCGGAAGAGGCCGTGGAAAAGGGGACCACAGAAGAAGCACAAGTAGACGAGGAGTCAGCACAGATGGAGGCTGAAAATGGTGACAATAATCAGATTCAGGGTGATCAGCTTCCTGCAGTGAACACTAAGCTTTACTTTGGCAATTTGCCATATCATTGTGATAGTGCCCAACTTGCTGGTATTGTCCAGCAGTATGGCACTCCAGAATTGGTTGAGGTTCTTTATGACAGAGACACAGGAAGAAGCAGAGGATTTGCATTCGTGACGATGAGCTGTGTTGAGGATTGTAATGCAGTTATTGAGAATCTTGATGGAAGTGAATATGGTGGCAGATTCTTGAGAGTGAATTTCTCAGACAAGCCCAAGAAAAGAGAGCCATTATACCCAGAAACTGAGCACAAGCTTTTTGTGGGCAACTTGTCCTGGTCAATCACTTCAGAGAGCTTGTACCAAGCATTCCAAGAGTATGGAAATGTGGTTGGAGCTCGGGTTTTGTATGATGGAGAGACAGGAAAATCTCGAGGCTACGGTTTTGTGTGCTACTCCACCAGATCAGAGATGGAAAACGCCCTTGCTTCTCTTAATGGAGTGGAATTAGAAGGGCGAGCAATCCGAGTAAGCTTGGCCGAAGGGAAGAAGTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_319262.p1 GENE.S_Transcript_319262~~S_Transcript_319262.p1 ORF type:complete len:298 (+),score=65.08,RRM_1|PF00076.18|1.4e-13,RRM_1|PF00076.18|1e-21,RRM_6|PF14259.2|2e-10,RRM_6|PF14259.2|1.7e-12,RRM_5|PF13893.2|4.7e+03,RRM_5|PF13893.2|0.00014,RRM_5|PF13893.2|2.3e-07 S_Transcript_319262:264-1157(+)
MATTIGSSFSTAKHTFRSYPSSTNNKLLSIPEPLLVKFGYATKTPQSPLVSHSQLYYGTEPLSIGSLPHMWRAPLRLAAAMVASEEAVEKGTTEEAQVDEESAQMEAENGDNNQIQGDQLPAVNTKLYFGNLPYHCDSAQLAGIVQQYGTPELVEVLYDRDTGRSRGFAFVTMSCVEDCNAVIENLDGSEYGGRFLRVNFSDKPKKREPLYPETEHKLFVGNLSWSITSESLYQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTRSEMENALASLNGVELEGRAIRVSLAEGKKS*

Click here to download the sequence:
Link to NCBI Protein BLAST