Transcript Information: S_Transcript_319264.p1


Annotated TAIR IDAT1G60000.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22093678-22094540 | Reverse length=258
E-Value1.9E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59900645866966
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 11.3714077374362
Replicate 21.4387040925869
Replicate 31.2337146523783
Condition 3: 24 Hour
Replicate 12.0369827049107
Replicate 20.072873992206905
Replicate 31.8652958884813


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_319264.p1 GENE.S_Transcript_319264~~S_Transcript_319264.p1 ORF type:complete len:311 (+),score=62.12,RRM_1|PF00076.18|2.4e-13,RRM_1|PF00076.18|2e-19,RRM_6|PF14259.2|4.3e-09,RRM_6|PF14259.2|3.7e-11,RRM_5|PF13893.2|0.00015,RRM_5|PF13893.2|2.5e-05 S_Transcript_319264:264-1196(+)
ATGGCGGCCACCGCAACGGCCACCATGGGCTCCTCTTTCTCGACTGCCAATTACACCTCCAGATCATACCCATCATCAACCAATAATAAGCTCTTATCAATACCAGAACCCCTCCTTGTCAAATTTGGATATGCTACTAAAACACCACATTCTCCTTTGGTATCTCATTCTCAACTGTATTATGGGACTGAACCACTTTCCATTGGGTCCCTGCCTCACATGTGGCGGGCCCCGTTGAGGCTAGCTGCCGTCATGGTGGCCTCAGAAGAGGCCGTGGTAAAGGGCACCACAGAGGAAGCAGAAGTAGAGGAGGAGTTAACACAGGTGGAGGCTGAAAATGGTGACAATGATCAGATTCAGGGTGAGGTTCCTGCAGTGAACACTAAGCTTTACTTTGGCAATTTGCCATATCATTGTGATAGTGCCCAACTTGCTGGTATAGTCCAGCAGTATGGCATTCCGGAATTGGTTGAGGTTCTTTATGACAGAGACACAGGAAGAAGCAGAGGATTTGCATTCGTGACGATGAGCTGTGTTGAGGATTGTAATGCAGTTATTGAGAATCTTGATGGAAGTGAATATGGTGGCAGATTCTTGAGAGTGAATTTCTCAGACAAGCCCAAGAAAAGAGAGCCATTATACCCAGAAACTGAGCACAAGCTTTTTGTGGGCAACTTGTCCTGGTCAATCACTTCAGAGAGCTTGTACCAAGCATTCCAAGAGTATGGAAATGTGGTTGGAGCTCGGGTTTTGTATGATGGAGAGACAGGAAAATCTCGAGGCTACGGTTTTGTGTGCTACTCCACCAGATCAGAGATGGAAAATGCTCTTGCTTCTCTTAATGGAGTGGTAATGTTATCTTCATTTTTTGTGTCCATCCTTCATATGACTATGGCCCCATTGTGTGCACAATATAAATGTTTGATGGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_319264.p1 GENE.S_Transcript_319264~~S_Transcript_319264.p1 ORF type:complete len:311 (+),score=62.12,RRM_1|PF00076.18|2.4e-13,RRM_1|PF00076.18|2e-19,RRM_6|PF14259.2|4.3e-09,RRM_6|PF14259.2|3.7e-11,RRM_5|PF13893.2|0.00015,RRM_5|PF13893.2|2.5e-05 S_Transcript_319264:264-1196(+)
MAATATATMGSSFSTANYTSRSYPSSTNNKLLSIPEPLLVKFGYATKTPHSPLVSHSQLYYGTEPLSIGSLPHMWRAPLRLAAVMVASEEAVVKGTTEEAEVEEELTQVEAENGDNDQIQGEVPAVNTKLYFGNLPYHCDSAQLAGIVQQYGIPELVEVLYDRDTGRSRGFAFVTMSCVEDCNAVIENLDGSEYGGRFLRVNFSDKPKKREPLYPETEHKLFVGNLSWSITSESLYQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTRSEMENALASLNGVVMLSSFFVSILHMTMAPLCAQYKCLME*

Click here to download the sequence:
Link to NCBI Protein BLAST