Transcript Information: S_Transcript_319297.p1


Annotated TAIR IDAT2G19070.1
Annotated Gene Namespermidine hydroxycinnamoyl transferase
Annotated Gene Symbol(s)SHT
Annotation TypeHomolog
Chromosome Positionchr2:8260185-8261958 | Reverse length=451
E-Value2E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4006842755358
Replicate 20.82942817885394
Replicate 31.386671885985
Condition 2: 8 Hour
Replicate 10.80170640289974
Replicate 22.8595596005666
Replicate 31.7629648395097
Condition 3: 24 Hour
Replicate 11.806719687192
Replicate 20.85202299159201
Replicate 30.75855772646966


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_319297.p1 GENE.S_Transcript_319297~~S_Transcript_319297.p1 ORF type:complete len:133 (+),score=16.96,Transferase|PF02458.11|3.2e-25 S_Transcript_319297:220-618(+)
ATGCTTAAGAAGGTTGCTAATGCTAATAATAGAGATGGTGTAAGACCATATAGTCGTTATGAAGTTATTGCAACTCATATATGGAAATGTGTATCCAAGGCACGAAACCATGAGAGTGAGCAACCTACCGATTTGCATATCATTGTTAACTCTCGTGCTCGCATGAATCCACCTCTGTTATCCAGTTACTTTGGAAATGCAATTGTTATTGTACCAACATCTACCCAAGCTGGTGACCTCATTTTAAGGCCTCTAAGCGACAGTTGCAGTAAAATAAGAGAAGCAATAGAGATGGTGAATAATGAGTATGTATTGTCAATGATTGAGTACCTCAAGAGGCAAGAAAGCTTGTGCCCATTTCAAGACCTTCAAGGCTATCTATGGAAAACCCTAATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_319297.p1 GENE.S_Transcript_319297~~S_Transcript_319297.p1 ORF type:complete len:133 (+),score=16.96,Transferase|PF02458.11|3.2e-25 S_Transcript_319297:220-618(+)
MLKKVANANNRDGVRPYSRYEVIATHIWKCVSKARNHESEQPTDLHIIVNSRARMNPPLLSSYFGNAIVIVPTSTQAGDLILRPLSDSCSKIREAIEMVNNEYVLSMIEYLKRQESLCPFQDLQGYLWKTLI*

Click here to download the sequence:
Link to NCBI Protein BLAST