Transcript Information: S_Transcript_319300.p1


Annotated TAIR IDAT2G19070.1
Annotated Gene Namespermidine hydroxycinnamoyl transferase
Annotated Gene Symbol(s)SHT
Annotation TypeHomolog
Chromosome Positionchr2:8260185-8261958 | Reverse length=451
E-Value1E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52525660332593
Replicate 21.0160495190961
Replicate 30.60666895011844
Condition 2: 8 Hour
Replicate 10.42089586152236
Replicate 20.58873285894017
Replicate 30.84141503703874
Condition 3: 24 Hour
Replicate 10.28743267750782
Replicate 20.2982080470572
Replicate 30.99560701599142


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_319300.p1 GENE.S_Transcript_319300~~S_Transcript_319300.p1 ORF type:complete len:152 (+),score=25.06,Transferase|PF02458.11|4.3e-36 S_Transcript_319300:371-826(+)
ATGGTAGTGACAACCAAGGCTAGTTATGTAGTAAAACCAGCAGAATCAACATGGAATGGAACCCTTCCTCTATCAGAATTAGATCAAGTTGGAATGGTAAGACACACACTTTTCATATACATATACAAGAGCCCAACAAAAAGCCATGATCAACCAAACACTAACAATCAAACCATCTTTGAAAAACTTAAGGATTCCTTGAGCCATGTTCTTGTCCCATTTTATCCTCTAGCAGGCCGTTTGCATTGGCTTGAGGGAGGGAGATTAGAGCTCAAGTGTAATGCCATGGGGGCAGAAATGATTGAAGCTCAATCTGAGTTGAAATTAAGTGATTTTGGTGATTTCTCTCATCATGATTCCATGTTAGAAGAACTTGTTCCTGTGGTGGATTTTTTGAAGCAACCATTCCATGAGATACCACTTCTCTTGGTCCAGGTATATAATCTATTCCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_319300.p1 GENE.S_Transcript_319300~~S_Transcript_319300.p1 ORF type:complete len:152 (+),score=25.06,Transferase|PF02458.11|4.3e-36 S_Transcript_319300:371-826(+)
MVVTTKASYVVKPAESTWNGTLPLSELDQVGMVRHTLFIYIYKSPTKSHDQPNTNNQTIFEKLKDSLSHVLVPFYPLAGRLHWLEGGRLELKCNAMGAEMIEAQSELKLSDFGDFSHHDSMLEELVPVVDFLKQPFHEIPLLLVQVYNLFQ*

Click here to download the sequence:
Link to NCBI Protein BLAST