Transcript Information: S_Transcript_319301.p1


Annotated TAIR IDAT2G19070.1
Annotated Gene Namespermidine hydroxycinnamoyl transferase
Annotated Gene Symbol(s)SHT
Annotation TypeHomolog
Chromosome Positionchr2:8260185-8261958 | Reverse length=451
E-Value4E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.6401752874442
Replicate 20
Replicate 30.76052519932373
Condition 2: 8 Hour
Replicate 11.3190963082763
Replicate 20.99942966431768
Replicate 31.2452557020092
Condition 3: 24 Hour
Replicate 10.67561495331735
Replicate 20.7009426260726
Replicate 30.3466947684552


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_319301.p1 GENE.S_Transcript_319301~~S_Transcript_319301.p1 ORF type:complete len:291 (+),score=70.67,Transferase|PF02458.11|1.7e-59 S_Transcript_319301:261-1133(+)
ATGGGGGCAGAAATGATTGAAGCTCAATCTGAGTTGAAATTAAGTGATTTTGGTGATTTCTCTCATCATGATTCCATGTTAGAAGAACTTGTTCCTGTGGTGGATTTTTTGAAGCAACCATTCCATGAGATACCACTTCTCTTGGTCCAGGTCACTCAATTTCAATGTGGTGGCTTGAGTCTTGGCATAGCAGCTTCCCATGTGATTGTTGATGCCAAAGCCATCTTCCATTTTACTGATGAATGGGCTAGGCTCACTCGAGGGGAGCCATTGGAGGCTTTACCTTACATGGACCGTGGAATCCTTCAACCTCCATGCAATCACAAAGCTATCATTCAAAAGGAAATTGTTCAAACTATGACTCAACCTTCTAAGCTTATGATCAAAGAAGTTGAGGCAACAAATGAAGATGTAAGTGATAAGAAGAAGTTATCAGCTGCCAAATTGCTCTTGACAAAAACTCAGATTGACATGCTTAAGAAGGTTGCTAATGGTGGTGATGGAGATGGTGTTATAAGACCATACACTCGTTTTGAAATTATTGCAACTCATATATGGAGATGTGTATCTAAGGCACGACATCATGGAAGCCAGCAACCTACAGATTTAGTTACCATTGTTAACTCTAGGAGTCGCATGAATCCACCACTACCACCAAGTTACTTTGGCAATGCAATTGTTGCAGTGCCAACATCTAGCAAAGCAGGGGAGCTCATTTCAAGACCTTTGAGCGAAGTTTGCAGTAAAATAAGAGAAGCAATAGAGATGGTGAATAATGAGTATGTATGGTCAATGATTGAGTACCTTAAGAGTCAAGAAAGCTTGTGCCCATTTCAAGACCTTCAAGGCTATCTATGGAAAACCCTAATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_319301.p1 GENE.S_Transcript_319301~~S_Transcript_319301.p1 ORF type:complete len:291 (+),score=70.67,Transferase|PF02458.11|1.7e-59 S_Transcript_319301:261-1133(+)
MGAEMIEAQSELKLSDFGDFSHHDSMLEELVPVVDFLKQPFHEIPLLLVQVTQFQCGGLSLGIAASHVIVDAKAIFHFTDEWARLTRGEPLEALPYMDRGILQPPCNHKAIIQKEIVQTMTQPSKLMIKEVEATNEDVSDKKKLSAAKLLLTKTQIDMLKKVANGGDGDGVIRPYTRFEIIATHIWRCVSKARHHGSQQPTDLVTIVNSRSRMNPPLPPSYFGNAIVAVPTSSKAGELISRPLSEVCSKIREAIEMVNNEYVWSMIEYLKSQESLCPFQDLQGYLWKTLI*

Click here to download the sequence:
Link to NCBI Protein BLAST