Transcript Information: S_Transcript_319307.p1


Annotated TAIR IDAT2G19070.1
Annotated Gene Namespermidine hydroxycinnamoyl transferase
Annotated Gene Symbol(s)SHT
Annotation TypeHomolog
Chromosome Positionchr2:8260185-8261958 | Reverse length=451
E-Value3E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21903704720313
Replicate 20.36317349065868
Replicate 30.22768809979754
Condition 2: 8 Hour
Replicate 10.26327642366831
Replicate 20
Replicate 30.26315861240718
Condition 3: 24 Hour
Replicate 10.62927647915292
Replicate 20
Replicate 30.20758884284046


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_319307.p1 GENE.S_Transcript_319307~~S_Transcript_319307.p1 ORF type:complete len:243 (+),score=59.10,Transferase|PF02458.11|5.1e-45 S_Transcript_319307:261-989(+)
ATGGGGGCAGAAATGATTGAAGCTCAATCTGAGTTGAAATTAAGTGATTTTGGTGATTTCTCTCATCATGATTCCATGTTAGAAGAACTTGTTCCTGTGGTGGATTTTTTGAAGCAACCATTCCATGAGATACCACTTCTCTTGGTCCAGGTCACTCAATTTCAATGTGGTGGCTTGAGTCTTGGCATAGCAGCTTCCCATGTGATTGTTGATGCCAAAGCCATCTTCCATTTTACTGATGAATGGGCTAGGCTCACTCGAGGGGAGCCATTGGAGGCTTTACCTTACATGGACCGTGGAATCCTTCAACCTCCATGCAATCACAAAGCTATCATTCAAAAGGAAATTGTTCAAACTATGACTCAACCTTCTAAGCTTATGATCAAAGAAGTTGAGGCAACAAATGAAGATGTAAGTGATAAGAAGAAGTTATCAGCTGCCAAATTGCTCTTGACAAAAACTCAGATTGACATGCTTAAGAAGGTTGCTAATGGTGGTGATGGAGATGGTGTTATAAGACCATACACTCGTTTTGAAATTATTGCAACTCATATATGGAGATGTGTATCTAAGGCACGACATCATGGAAGCCAGCAACCTACAGATTTAGTTACCATTGTTAACTCTAGGAGTCGCATGAATCCACCACTACCACCAAGGTATATAATGCTAGCAAATGTGACCTTCTTTGGCAGTTTAATTTGCTTGTTCTTTTGGGTCGGATATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_319307.p1 GENE.S_Transcript_319307~~S_Transcript_319307.p1 ORF type:complete len:243 (+),score=59.10,Transferase|PF02458.11|5.1e-45 S_Transcript_319307:261-989(+)
MGAEMIEAQSELKLSDFGDFSHHDSMLEELVPVVDFLKQPFHEIPLLLVQVTQFQCGGLSLGIAASHVIVDAKAIFHFTDEWARLTRGEPLEALPYMDRGILQPPCNHKAIIQKEIVQTMTQPSKLMIKEVEATNEDVSDKKKLSAAKLLLTKTQIDMLKKVANGGDGDGVIRPYTRFEIIATHIWRCVSKARHHGSQQPTDLVTIVNSRSRMNPPLPPRYIMLANVTFFGSLICLFFWVGY*

Click here to download the sequence:
Link to NCBI Protein BLAST