Transcript Information: S_Transcript_319362.p1


Annotated TAIR IDAT5G48930.1
Annotated Gene Namehydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
Annotated Gene Symbol(s)HCT
Annotation TypeHomolog
Chromosome Positionchr5:19836654-19838092 | Reverse length=433
E-Value1E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.30650061759
Replicate 214.204809715112
Replicate 316.674254541338
Condition 2: 8 Hour
Replicate 17.3032158620319
Replicate 27.201896479912
Replicate 39.6359311091012
Condition 3: 24 Hour
Replicate 115.111871455822
Replicate 216.765011303052
Replicate 314.856820676986


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_319362.p1 GENE.S_Transcript_319362~~S_Transcript_319362.p1 ORF type:internal len:146 (-),score=24.97,Transferase|PF02458.11|1e-24 S_Transcript_319362:3-437(-)
ACAGAACACAGCATTTCAAAACAGAGAGAAAGGGAAGAGAAAGAGAGAAAAAGAAAACCCCAAACAGCAGGATTTTCTCCGATTCTGATCGACGACCAAACGAACTCTGATCGTCGCCAAATTTTGAAGATGAGCATCAAAGAGAAGCAAAGGAGCATGGTGCCTCCAGCTGAGGAAACCCCTGGTGGAACATTATGGCTATCAAACCATGACATTTACAGTAGCATTCCGAGAAAACACACAATTTTAGCCATCTTTTATCGTCACCCTCCAAATAAGAGTGACAATTTTTTCGATGCTGAGATTTTGAAGGAGTCTCTGAGCAGAGTTTTGGTGGCATTTTATCCTCTAGCAGGTAGATTACACCAAAACTCAAAGAGTGGTCGTCTCGAGATCGATTGCAATGGAGAAGGAGCGTTGTTTATCGAGGTCGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_319362.p1 GENE.S_Transcript_319362~~S_Transcript_319362.p1 ORF type:internal len:146 (-),score=24.97,Transferase|PF02458.11|1e-24 S_Transcript_319362:3-437(-)
TEHSISKQREREEKERKRKPQTAGFSPILIDDQTNSDRRQILKMSIKEKQRSMVPPAEETPGGTLWLSNHDIYSSIPRKHTILAIFYRHPPNKSDNFFDAEILKESLSRVLVAFYPLAGRLHQNSKSGRLEIDCNGEGALFIEVE

Click here to download the sequence:
Link to NCBI Protein BLAST