Transcript Information: S_Transcript_319586.p1


Annotated TAIR IDAT1G80170.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30153646-30155683 | Reverse length=444
E-Value2.8E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60484093716319
Replicate 20.25071351769903
Replicate 30.83830618561821
Condition 2: 8 Hour
Replicate 10.48466796175302
Replicate 20.50845110544833
Replicate 31.2111277048285
Condition 3: 24 Hour
Replicate 10.49647462478623
Replicate 20.51508662673517
Replicate 30.57322828193446


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_319586.p1 GENE.S_Transcript_319586~~S_Transcript_319586.p1 ORF type:5prime_partial len:88 (-),score=13.53,Glyco_hydro_28|PF00295.13|1.3e-06 S_Transcript_319586:435-698(-)
AGGATTCTGGGTGCGATTGTTGCTCCTAAACATCCTGAAGCATGGCTTGGTTTGAACCCTCGCAAGTGGCTTTATTTCCATAGTGTAGAGCATCTAACTCTAGAAGGTGGAGGGACGATCAATGGGATGGGTGAGGAGTGGTGGAAACTGTCTTGCAAGTTCAATGCAACAATTCCTTGTCATCATGCTCCTACGGTTAGTTCTTCATTATTCTTTAGCCTTGCTTATAAGCTGCTCTTTGAAAGATTGATGTTCTCTTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_319586.p1 GENE.S_Transcript_319586~~S_Transcript_319586.p1 ORF type:5prime_partial len:88 (-),score=13.53,Glyco_hydro_28|PF00295.13|1.3e-06 S_Transcript_319586:435-698(-)
RILGAIVAPKHPEAWLGLNPRKWLYFHSVEHLTLEGGGTINGMGEEWWKLSCKFNATIPCHHAPTVSSSLFFSLAYKLLFERLMFSL*

Click here to download the sequence:
Link to NCBI Protein BLAST