Transcript Information: S_Transcript_319720.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value8E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.96774549946111
Replicate 20.51054389058712
Replicate 30.60967722590415
Condition 2: 8 Hour
Replicate 11.7624289518292
Replicate 22.0338044217933
Replicate 31.4445450443045
Condition 3: 24 Hour
Replicate 10.61382317246298
Replicate 20.48699099254961
Replicate 30.54196128473803


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_319720.p1 GENE.S_Transcript_319720~~S_Transcript_319720.p1 ORF type:5prime_partial len:605 (+),score=109.13,PPR_2|PF13041.2|3.8e-08,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|7.9e-14,PPR_2|PF13041.2|3.1e-16,PPR_2|PF13041.2|4.6e-09,PPR_2|PF13041.2|2.8e-17,PPR_2|PF13041.2|8.4e-18,PPR_2|PF13041.2|6.4e-11,PPR_2|PF13041.2|5.4e-16,PPR_2|PF13041.2|3e-16,PPR_2|PF13041.2|0.0089,PPR_2|PF13041.2|3e-09,PPR_2|PF13041.2|5.7e-14,PPR_1|PF12854.3|95,PPR_1|PF12854.3|0.046,PPR_1|PF12854.3|2.4e-10,PPR_1|PF12854.3|2.5e-05,PPR_1|PF12854.3|1.5e-13,PPR_1|PF12854.3|3e-10,PPR_1|PF12854.3|5.3e-10,PPR_1|PF12854.3|1.2e-07,PPR_1|PF12854.3|2.1e-11,PPR_1|PF12854.3|3.3e-07,PPR_1|PF12854.3|8.9e-10,PPR_1|PF12854.3|1e-08,PPR_1|PF12854.3|8.8e-07,PPR_1|PF12854.3|9.6e-09,PPR_1|PF12854.3|4.2,PPR|PF01535.16|0.8,PPR|PF01535.16|0.062,PPR|PF01535.16|0.0002,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|3.9e-09,PPR|PF01535.16|2.3e-07,PPR|PF01535.16|1.5e-07,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|7.6e-07,PPR|PF01535.16|7.7e-08,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|3.6e-05,PPR|PF01535.16|9.1e-07,PPR|PF01535.16|1.5e+02,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|5.8,PPR_3|PF13812.2|58,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|7.7e-05,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.0034,PPR_3|PF13812.2|0.00011,PPR_3|PF13812.2|0.0075,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.067,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|1.3e+03,ATP13|PF12921.3|0.48,ATP13|PF12921.3|28,ATP13|PF12921.3|3.4e+03,ATP13|PF12921.3|5.7e+02,ATP13|PF12921.3|30 S_Transcript_319720:1-1815(+)
CTGGTATTACTTGTTATGCTCAAAAACCATCCTCATCTGCAAATGCAAGGGCTAAAGGCTGGAATTCCATCTTCAACATCAAAAACTTCTCTTATTCCTCTGTCATCTTTATTTAGTAATCCATCATCATCATCCCATGTTTTACCTTCTGCAAATCCCAGACCTGCAAAAATTGAACTACACATTAGAGCCCAGTCCAAGTTAGGCAAACTCACCCTACATGATGCAATCAAATATTTTGATCATTTGATCTATTTACAACCCTTTCCTACAATTGACACCTTTAATCATCTTCTTGGGTCACTTGCCAAAATGGGTCACTACCAAGATGTCTTCTTACTGTACAAAAAGCTGAATTATGTAGGGCTTAGGGCTGATCTTTATACATTCAACATCTTGATCAACTGTTGTTGTCACTTACGTTGCATGGGGTGTGGGTTTGGGGTGCTGGGGCAGGTATTAAAGTGGGGATTTGTTCCTGATTCAGTTACTGTTAAGACTATCGTGAAAGGACTGTGTCAAGAAGGGAGAGTCTTTGATGCACTCCAAGTGTTTGATGATATGTCTGAGTGGGGTGCTCAGAAGGAGGCTGTTGCTTATGGGATGCTTATTAGTGGACTTTGTAAACATGGAGAGATGGGCCTTGCTCTTGAGCTGCATAGGAAGATGGTCAAGAGTGGTAATTGTAAGCCCAATGTGGTTACCTATAGTGCTATCATTGATTCCTTTTGTAAGAGTGGTTTGATGAATGAGGCTCTAGGTGTGTTTAAGGAGATGCTTGGTGCGGGTATAACCCCGGATGTTGTTGTTTGCAGCTCATTGATCAAGGGTTTGTGTGGTTTTGGGTTGCTGGAAGAAGCTAAGAAGCTTTTCGATGAGATGATCACTCGAGGCATTTCAGCTGATGTAGTTGCATATAATTGTTTGCTCCATGGATTCTGTCAAGCGGGCAGAGGGAAACAGGCAGTGAGGATTTTTAAGCAAATGATGAGGCGAGGGACCTTGCCTGACTTGGTAACATTCACGATGATGATAGACTATCTATGCAAATTGGGGAAGGTAGGAGAAGCAAGTCACTTATTTAAACTGATGATCGAACAGGGTTTGGAGCCAAATGTTTATACCTATAATTCACTCCTTAACGGCCTATGTTTACTTGGCGAGTTGGATGATGCTGCAAAGCTTTTCGAGTTGTTAAAAGATAAGGGCATTAAGCTTGATGTTACTAGCTACAATATAATGATGAATGGATACTTCAAGAATCATAGGGCAGATGAAGCTGTCTGGCTTTTTCAGGAACTGAAAGATAAGGGATTCAGGCCCTCATCAGCTACCTACAACACACTCATTGGAGGACTTTGCAAGGCAAGAAGATTAGGAAATGCCAAAAGAGCATTTGAAGAGATGCAGTCTCTTGGGACCCCTCCTGACTTGCATACATATGGTATTATGTTGAATGGCCTCTGCAAAAATGGGCTAATGGAGGAAGCTTTGGATTTATTTTCATGCTTGAGAAATTCTGATCTCAAATACGGGGTTGAAGTTTTCAACATAATCATTGGTGGGTTGTGCAGAGCTGGTAAATTGGACGAAGCTAGGGAACAACTTAATGAAATAGTAAAAGCGGGATTAGTACCTGATATTTCCACTTACAATACGGTCATTAATTGGTACTGTAAGAAAGAGATGCATTCCCAAGCAATCAAGTTTCTTCAGAAAATGGAAGAAGGGGGTTGCCCCCAGGACTCCATTTCCTACAATATCATCATTCAGGAGCTTCTTCAAGCAAATGAGACTGATAACGCTGTGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_319720.p1 GENE.S_Transcript_319720~~S_Transcript_319720.p1 ORF type:5prime_partial len:605 (+),score=109.13,PPR_2|PF13041.2|3.8e-08,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|7.9e-14,PPR_2|PF13041.2|3.1e-16,PPR_2|PF13041.2|4.6e-09,PPR_2|PF13041.2|2.8e-17,PPR_2|PF13041.2|8.4e-18,PPR_2|PF13041.2|6.4e-11,PPR_2|PF13041.2|5.4e-16,PPR_2|PF13041.2|3e-16,PPR_2|PF13041.2|0.0089,PPR_2|PF13041.2|3e-09,PPR_2|PF13041.2|5.7e-14,PPR_1|PF12854.3|95,PPR_1|PF12854.3|0.046,PPR_1|PF12854.3|2.4e-10,PPR_1|PF12854.3|2.5e-05,PPR_1|PF12854.3|1.5e-13,PPR_1|PF12854.3|3e-10,PPR_1|PF12854.3|5.3e-10,PPR_1|PF12854.3|1.2e-07,PPR_1|PF12854.3|2.1e-11,PPR_1|PF12854.3|3.3e-07,PPR_1|PF12854.3|8.9e-10,PPR_1|PF12854.3|1e-08,PPR_1|PF12854.3|8.8e-07,PPR_1|PF12854.3|9.6e-09,PPR_1|PF12854.3|4.2,PPR|PF01535.16|0.8,PPR|PF01535.16|0.062,PPR|PF01535.16|0.0002,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|3.9e-09,PPR|PF01535.16|2.3e-07,PPR|PF01535.16|1.5e-07,PPR|PF01535.16|4.2e-06,PPR|PF01535.16|7.6e-07,PPR|PF01535.16|7.7e-08,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|3.6e-05,PPR|PF01535.16|9.1e-07,PPR|PF01535.16|1.5e+02,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|5.8,PPR_3|PF13812.2|58,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.66,PPR_3|PF13812.2|7.7e-05,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.0034,PPR_3|PF13812.2|0.00011,PPR_3|PF13812.2|0.0075,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.067,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|1.3e+03,ATP13|PF12921.3|0.48,ATP13|PF12921.3|28,ATP13|PF12921.3|3.4e+03,ATP13|PF12921.3|5.7e+02,ATP13|PF12921.3|30 S_Transcript_319720:1-1815(+)
LVLLVMLKNHPHLQMQGLKAGIPSSTSKTSLIPLSSLFSNPSSSSHVLPSANPRPAKIELHIRAQSKLGKLTLHDAIKYFDHLIYLQPFPTIDTFNHLLGSLAKMGHYQDVFLLYKKLNYVGLRADLYTFNILINCCCHLRCMGCGFGVLGQVLKWGFVPDSVTVKTIVKGLCQEGRVFDALQVFDDMSEWGAQKEAVAYGMLISGLCKHGEMGLALELHRKMVKSGNCKPNVVTYSAIIDSFCKSGLMNEALGVFKEMLGAGITPDVVVCSSLIKGLCGFGLLEEAKKLFDEMITRGISADVVAYNCLLHGFCQAGRGKQAVRIFKQMMRRGTLPDLVTFTMMIDYLCKLGKVGEASHLFKLMIEQGLEPNVYTYNSLLNGLCLLGELDDAAKLFELLKDKGIKLDVTSYNIMMNGYFKNHRADEAVWLFQELKDKGFRPSSATYNTLIGGLCKARRLGNAKRAFEEMQSLGTPPDLHTYGIMLNGLCKNGLMEEALDLFSCLRNSDLKYGVEVFNIIIGGLCRAGKLDEAREQLNEIVKAGLVPDISTYNTVINWYCKKEMHSQAIKFLQKMEEGGCPQDSISYNIIIQELLQANETDNAVD*

Click here to download the sequence:
Link to NCBI Protein BLAST