Transcript Information: S_Transcript_320016.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25589424264597
Replicate 20.2121422072838
Replicate 30.53200200241156
Condition 2: 8 Hour
Replicate 10.82020731988973
Replicate 21.0755696461407
Replicate 31.0248003656241
Condition 3: 24 Hour
Replicate 11.6803756531226
Replicate 20.21792126515719
Replicate 30.7275589732245


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_320016.p1 GENE.S_Transcript_320016~~S_Transcript_320016.p1 ORF type:5prime_partial len:104 (+),score=15.82,RVT_1|PF00078.23|1.1e-21 S_Transcript_320016:1-312(+)
GAGGTAGTTGACGACGCTAGAAGGACAGGCAAAAAGGGGATTGTCTTTAAGCTAGACTTTGAGAAGGCCTATGATAGGGTGTCCTGGGGGTTTTTGGATAGAGTGATGGAGGCTAAGGGTTTTGGTGACCGATGGCGTAAGTGGATTTGGGGTTGCTTTAGTAATGCCAGTTTTTCGGTGCTGGTCAATGGGGCCCCAAGGGATTGGTTTTCTTCTTCCCGTGGTTTGAGGCAGGGGGACCCTCTATCTCCTTTTCTTTTTACCTTGGTGGTGGACGTCTTGAGTCATATGATAGATAGGGGGTGGAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_320016.p1 GENE.S_Transcript_320016~~S_Transcript_320016.p1 ORF type:5prime_partial len:104 (+),score=15.82,RVT_1|PF00078.23|1.1e-21 S_Transcript_320016:1-312(+)
EVVDDARRTGKKGIVFKLDFEKAYDRVSWGFLDRVMEAKGFGDRWRKWIWGCFSNASFSVLVNGAPRDWFSSSRGLRQGDPLSPFLFTLVVDVLSHMIDRGWR*

Click here to download the sequence:
Link to NCBI Protein BLAST