Transcript Information: S_Transcript_320022.p1


Annotated TAIR IDAT5G10490.1
Annotated Gene NameMSCS-like 2
Annotated Gene Symbol(s)MSL2
Annotation TypeHomolog
Chromosome Positionchr5:3300376-3304005 | Reverse length=673
E-Value4E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.132235810794
Replicate 210.33442212389
Replicate 38.2369518456168
Condition 2: 8 Hour
Replicate 111.708057429014
Replicate 210.527928771636
Replicate 311.702818292931
Condition 3: 24 Hour
Replicate 110.422722188323
Replicate 29.628416682762
Replicate 38.7919980497137


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_320022.p1 GENE.S_Transcript_320022~~S_Transcript_320022.p1 ORF type:5prime_partial len:459 (-),score=98.78,MS_channel|PF00924.14|6.3e-15,MS_channel|PF00924.14|0.054 S_Transcript_320022:133-1509(-)
CCTGGGACAGCGTTGTTGACACTAGCTGGCCGTGAGATATTTACCAATTTCCTATCAAGTGCAATGATCCATGCAACACGACCATTCGTGGTGAATGAATGGATTCAAGCAAAAATTGAAGGATATGAAGTGTCGGGTACTGTTGAGCATGTCGGCTGGTGGTCACCGACAATAATAAGAGGTGAAGACCGTGAAGCAGTTCACATTCCTAACCACAAGTTCACAGTGAATGTGGTGAGGAACCTTAGTCAGAAAACTCACTGGCGTATCAAGACCCATCTTGCAATCAGTCATTTAGATGTTAGTAAGATAAATGTGAGTACTCTTGAACATTTTTTCCAGTGTAATTCCCTTTGTACATCCAACAACCTGCGGTGTATCTTTCCTGTGAACCATTATGTTCTGCTTCTGCAGAATATTGTTGCTGATATGCGCAAAGTCTTAGCCAAGAATCCTCAAGTTGAACAGCAAAAGCTTCATAGAAGAGTGTTTTTAGAAAATGTTAATCCTGAAAATCAAGCTCTTCTGATTTTGATTTCCTGTTTTGTGAAGACATCACATCACGAAGAATACTTGTGTGTCAAGGAAGCTATATTGTTGGATCTTCTACGAGTAATCAGTCATCACGGGGCGCGACTTGCCACTCCAATTCGTACTATTCAGAAGTTTCATAGCGATGCCGACTTGGAAAACATGCCATTTTCAGAGTCGATCTTCAATCGTGGTGGACCAGCATCAAGACGTCGAATGCTTTTGATCGAGCCTCCTTACAAGATAAACGGAGAAGATAAATCAAAAACTCAGGCTCGCACAGCGCGACCTACTGGAGAGCAAGACAACCGCGGCAAAGTACAGCCAGCAGCTGACCGCAAAACTGATGGTAAACCAGTGCCTGAGCCAAGTATGAAAGAGATCTCAAAGCCTGGCAAGAGGACAGATGGTAAAGTGGTAGAAACTTCAGATTCTGAATTAAGGGTAGAGAACAAGGTGGCTGTGGCTTCCCAATCAGATCCTCAAGGTGATGATGAAGCCACTGTAAAGCCCATGATTGTTACCACGAAAGATTTGAAGAACTCAGAAAATGATCAATCTAAGGGGAGTGTTGATCATGCTGGCCCTGAAAAATCAATTGGCTCTTCAGTAAGCTCTCAGTCTAAGCACGTTGACAAGCTGTCAGCTTCTGAGCCATCTACATCAGCTCCAGCTGCTTTGGAAGAGAATATAGTTCTTGGGGTTGCATTGGAGGGTTCAAAGAGGACCCTGCCTATAGAAGAAGAGATTGATTCACCCTCAACTGCCTCAGAGACGAAAGAAATGGCTAAACATGGTAGTGGAAATGGTAGTCCGGCTGTTGATAAGGATGAAATGAACAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_320022.p1 GENE.S_Transcript_320022~~S_Transcript_320022.p1 ORF type:5prime_partial len:459 (-),score=98.78,MS_channel|PF00924.14|6.3e-15,MS_channel|PF00924.14|0.054 S_Transcript_320022:133-1509(-)
PGTALLTLAGREIFTNFLSSAMIHATRPFVVNEWIQAKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVSKINVSTLEHFFQCNSLCTSNNLRCIFPVNHYVLLLQNIVADMRKVLAKNPQVEQQKLHRRVFLENVNPENQALLILISCFVKTSHHEEYLCVKEAILLDLLRVISHHGARLATPIRTIQKFHSDADLENMPFSESIFNRGGPASRRRMLLIEPPYKINGEDKSKTQARTARPTGEQDNRGKVQPAADRKTDGKPVPEPSMKEISKPGKRTDGKVVETSDSELRVENKVAVASQSDPQGDDEATVKPMIVTTKDLKNSENDQSKGSVDHAGPEKSIGSSVSSQSKHVDKLSASEPSTSAPAALEENIVLGVALEGSKRTLPIEEEIDSPSTASETKEMAKHGSGNGSPAVDKDEMNK*

Click here to download the sequence:
Link to NCBI Protein BLAST