Transcript Information: S_Transcript_320260.p1


Annotated TAIR IDAT1G11915.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4021830-4023084 | Forward length=329
E-Value1.9E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78970330074719
Replicate 20.9165550558018
Replicate 30.43780975866114
Condition 2: 8 Hour
Replicate 11.0124814393891
Replicate 20.26554123014512
Replicate 30.8855248263197
Condition 3: 24 Hour
Replicate 11.1667890291712
Replicate 21.0760266623785
Replicate 30.59874289389


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_320260.p1 GENE.S_Transcript_320260~~S_Transcript_320260.p1 ORF type:complete len:337 (+),score=26.83,GUB_WAK_bind|PF13947.2|5.7e-14,GUB_WAK_bind|PF13947.2|7.1e+03,WAK_assoc|PF14380.2|1.8e-05 S_Transcript_320260:38-1048(+)
ATGATCAAATTCTTCCAAATGGACCACCCCAAATTCCATATTATCTTAACTATGATCACATTCATATTCTCATTTTTTCCATCAACATTACCACAATCCTCAAAATGCAGGACTTCTTGTGGAGGGATTCCCATAAAGTATCCATTAAGCATTGATGATGGATGTGGAAGCCCGTATTATCGCCATATCTTGGTGTGCTCCGAACCCGCCAATGTGTTGGAGCTCCGAACTCCATCGGGCCGGTATCCGGTCAAGTCCATTAGCTATACGGATCCTCATATTCTGATCTCGGATCCTCTCATGTGGGCCTGTAGTGATGGTGATCGGTTCCGGCCCACTAGGGCCTTTAGTCTTGACACTAGTGTACATCTATCGTTGTCTTCTCAGAATGAGTACCTCTTCTTTAATTGTAGTTCTGATCAGGTGATCATGGAGCCCAGACCAATGTTTTGTGAAAGGTTCCCGGACCGTTGTGATGCAAGCTGCGATCCATCAAGCTACTTGTGCCGTCATTTACCCGAATGTGGGCCCAATGCCATTAAGGGAAGCTCATGTTGCTCTTACTACCCTAAGGCAACAGAGTCCTTAAGAATGATGCTCAAGCATTGTGCTTCTTACACTAGTATTCATTGGAAGAATGTTGGTGGTTTAGGGACTTCTAGACCTTTTGATCAGGTCCCGGAGTATGGTTTGAGGGTGGATTTCGATATCCCGGTCACCACCAAGTGTCTCCGGTGCCAGGACCGAGCTCAGGGTGGCGGTACGTGTGGGTTCGACACCAGTAACCAGGAGTTCTTGTGCTTGTGTGAGGAGAAGAATGTCACCACTTCTTGTAGAGATCATGATAATGTGACACACAATGGGCGTACAGAAGTTATAGCAGGAACGGTGACGGCAGCGTCGGTGGCCGGAGGAGTAGGTATTGGAGCTGGCATTTGGTATCTGAAGAGGGTGAGAGCCAAAGCACCAGTTACTCATGGTGTTCAAAACAATGAAAACAGGCTTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_320260.p1 GENE.S_Transcript_320260~~S_Transcript_320260.p1 ORF type:complete len:337 (+),score=26.83,GUB_WAK_bind|PF13947.2|5.7e-14,GUB_WAK_bind|PF13947.2|7.1e+03,WAK_assoc|PF14380.2|1.8e-05 S_Transcript_320260:38-1048(+)
MIKFFQMDHPKFHIILTMITFIFSFFPSTLPQSSKCRTSCGGIPIKYPLSIDDGCGSPYYRHILVCSEPANVLELRTPSGRYPVKSISYTDPHILISDPLMWACSDGDRFRPTRAFSLDTSVHLSLSSQNEYLFFNCSSDQVIMEPRPMFCERFPDRCDASCDPSSYLCRHLPECGPNAIKGSSCCSYYPKATESLRMMLKHCASYTSIHWKNVGGLGTSRPFDQVPEYGLRVDFDIPVTTKCLRCQDRAQGGGTCGFDTSNQEFLCLCEEKNVTTSCRDHDNVTHNGRTEVIAGTVTAASVAGGVGIGAGIWYLKRVRAKAPVTHGVQNNENRLF*

Click here to download the sequence:
Link to NCBI Protein BLAST