Transcript Information: S_Transcript_320636.p1


Annotated TAIR IDAT5G59380.1
Annotated Gene Namemethyl-CPG-binding domain 6
Annotated Gene Symbol(s)MBD6, ATMBD6
Annotation TypeOrtholog
Chromosome Positionchr5:23952321-23953485 | Forward length=225
E-Value6.5E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.313739655536
Replicate 28.5266819545951
Replicate 39.6222970870959
Condition 2: 8 Hour
Replicate 19.4779512520591
Replicate 210.375350093786
Replicate 37.4142078626022
Condition 3: 24 Hour
Replicate 19.4977754306931
Replicate 212.043571369074
Replicate 311.819025639112


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_320636.p1 GENE.S_Transcript_320636~~S_Transcript_320636.p1 ORF type:5prime_partial len:207 (-),score=32.59,MBD|PF01429.15|1.1e-12 S_Transcript_320636:3-623(-)
AACAGAATGGACCAACTCCCACCCGACCCACTTCTACAGCCAGGAACATTCATTGACCCCAACCCAACTTCTAACGGAGACTCCAAACCCGAACCCATTCCGGATCCCATCGAACAGCAGATGCCGCCGACGGATCAAAAGCCCGAGTCGGAGGCTCCGGCGTCTACTAGACCCGAATGGTTGCCTCCAGGTTGGTCGTTTGTAGAACGGGTTAGGGTTTCTGGTGCATCTGCTGGCACCCGAGACAAGTATTATTTGGATCCAGTCACCAATCGTCGGTTCCGGTCAAAAAAGGAAGTTCTTTTCTATCTGGAAAATGGAACACCCATTAGCAGCAAGAAGAAGAATGCAACTGCAGTTCCTGATGCTGATAGCAAGCCACAAACCAACTCTTCAGCCTGTAAACGGAGGAAGTCTGAATCAAAGATTATGACGAGTGTCAAGAGATTTAATTTTGATGAAGTTCCGACAAAGGTTAAATGGGAGCTGACAGATATTTATGAAGGGACGTGGAGGCCTATGATTAATGGTGTTGATAGGGTGCCCGAATCTACAAAGCAAGACTGGGCTACTGTATTCTCATACCTTACAACACAAAATGGTGCTACTGCATTGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_320636.p1 GENE.S_Transcript_320636~~S_Transcript_320636.p1 ORF type:5prime_partial len:207 (-),score=32.59,MBD|PF01429.15|1.1e-12 S_Transcript_320636:3-623(-)
NRMDQLPPDPLLQPGTFIDPNPTSNGDSKPEPIPDPIEQQMPPTDQKPESEAPASTRPEWLPPGWSFVERVRVSGASAGTRDKYYLDPVTNRRFRSKKEVLFYLENGTPISSKKKNATAVPDADSKPQTNSSACKRRKSESKIMTSVKRFNFDEVPTKVKWELTDIYEGTWRPMINGVDRVPESTKQDWATVFSYLTTQNGATALF*

Click here to download the sequence:
Link to NCBI Protein BLAST