Transcript Information: S_Transcript_320697.p1


Annotated TAIR IDAT3G04990.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Frigida-like protein (TAIR:AT5G27220.1); Has 30900 Blast hits to 17560 proteins in 1427 species: Archae - 757; Bacteria - 4112; Metazoa - 14311; Fungi - 2221; Plants - 1348; Viruses - 71; Other Eukaryotes - 8080 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1383996-1384679 | Reverse length=227
E-Value0.001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22811143915869
Replicate 20.1260730831858
Replicate 30.15808059500229
Condition 2: 8 Hour
Replicate 10.12185937324076
Replicate 21.0227130806732
Replicate 30.36541453037111
Condition 3: 24 Hour
Replicate 10.43689766981188
Replicate 20.12950749472199
Replicate 30.36031492007309


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_320697.p1 GENE.S_Transcript_320697~~S_Transcript_320697.p1 ORF type:complete len:350 (+),score=73.18 S_Transcript_320697:72-1121(+)
ATGGCAATCTACAATTTGGATGAAACTCCCGATGTATTTGTGTGTCCTGCTTTTTATGATGATAAGTTTAGCTGCAGAATGGAAAGCTTTAAAGGGGAGGAAGAGAGGACAAAAATACGTAATATAGATTTTAGAAGTGATAAATTAATTATCTATGGAGTTGAGATAAAAGAGTCTATGTTAGACAAGTTCTATGATTCCTTAATTTTGAGGCCAAAAAAAGGGGTTATTGCTGTTAATTGTGATGGAGCATGCTATATACTAATCCCTGGAATATGTTATAGACCAATTCATAATGTTATCTTTGATTGGTCTCCCTTTGGAATTACTGTACCAAAGTCTGCAAATGATTCCTTGAGAAAAGAGAACGAGGAGCTTAAGAAGCAACTTTCAACATGTGAACTTGAATTACAAAAGAGTTTCAAATTACAGAAGGAACTTTCTGCTTGTATGGAAGAGAAAGAAAAAATAAAGATTGAATTGGAAAAGCTAGCACAACATCAATTTCCTAGAGTAGAAGCAGAATTACAAGCCACAATGACTGAATTGGAGCATTCGAAGAAAGTTAGAATGGAGGTGGAGGAAGAACTTGCCACCTACAAGAAGGAAAGCCAAAATAAGGATGATCAACTTGCTTTAGTTAATTCCAAGTTAGAAAACACCAAGTCCTTATTAGAGTTATCCAACAAAAATTTGAAGGAGCTTGAGGATCAACTTCTCATTTGCAACAAGGAAAAGCAAAAGATGGAAACAAAACTAGAAAAGATGGAAGATGAGCTTTCTTTGGCAAAACAAGACTTAGAATTCACCAAGAACAAATGGGAGTCACTAGCAAAGTCCACAAATGAAAAGCTAGATCAAGTTCTAAATTCCATGTTATGGATGGGTACTATAAGATCACAAGGCACAGGATGTGAAGATGCCTTTTTAGCATTCAAAGAATTGGACACTTCCATCTATACTCTCCCAATTGCTCAAGAACTTCCTGATTCAATTAACAACTTGGTAATTTCAGCCACGAGTGAAGAAAATATTGATCATCAAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_320697.p1 GENE.S_Transcript_320697~~S_Transcript_320697.p1 ORF type:complete len:350 (+),score=73.18 S_Transcript_320697:72-1121(+)
MAIYNLDETPDVFVCPAFYDDKFSCRMESFKGEEERTKIRNIDFRSDKLIIYGVEIKESMLDKFYDSLILRPKKGVIAVNCDGACYILIPGICYRPIHNVIFDWSPFGITVPKSANDSLRKENEELKKQLSTCELELQKSFKLQKELSACMEEKEKIKIELEKLAQHQFPRVEAELQATMTELEHSKKVRMEVEEELATYKKESQNKDDQLALVNSKLENTKSLLELSNKNLKELEDQLLICNKEKQKMETKLEKMEDELSLAKQDLEFTKNKWESLAKSTNEKLDQVLNSMLWMGTIRSQGTGCEDAFLAFKELDTSIYTLPIAQELPDSINNLVISATSEENIDHQG*

Click here to download the sequence:
Link to NCBI Protein BLAST