Transcript Information: S_Transcript_320699.p1


Annotated TAIR IDAT3G04990.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Frigida-like protein (TAIR:AT5G27220.1); Has 30900 Blast hits to 17560 proteins in 1427 species: Archae - 757; Bacteria - 4112; Metazoa - 14311; Fungi - 2221; Plants - 1348; Viruses - 71; Other Eukaryotes - 8080 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1383996-1384679 | Reverse length=227
E-Value0.001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.1260730831858
Replicate 30
Condition 2: 8 Hour
Replicate 10.3046484331019
Replicate 20.12783913508415
Replicate 30.060902421728518
Condition 3: 24 Hour
Replicate 10.18724185849081
Replicate 20.12950749472199
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_320699.p1 GENE.S_Transcript_320699~~S_Transcript_320699.p1 ORF type:complete len:350 (+),score=71.01 S_Transcript_320699:126-1175(+)
ATGACAATTTACAACCTTGATGAAACTCCTGATATATTCATCTGTCCAGCTTTTCTTAATAACAAGTTTGTTTATCACATGGACCGAATCAAAGCCGAGCAAGACAAGGCAAGAATCCATACCATAGATTTCAAAAGTGATAAAGTATTTGTTTATGGAGTTGAGATACAAGAATCAATGCTAGACAAGTTGTATGATTGTTTGATTTTTAGGACGAGACCTGGGCTTATAGCTGTTAATTGTGATGGAGCATGCTATATACTAATCCCTGGAATATGTTATAGACCAATTCATAATGTTATCTTTGATTGGTCTCCCTTTGGAATTACTGTACCAAAGTCTGCAAATGATTCCTTGAGAAAAGAGAACGAGGAGCTTAAGAAGCAACTTTCAACATGTGAACTTGAATTACAAAAGAGTTTCAAATTACAGAAGGAACTTTCTGCTTGTATGGAAGAGAAAGAAAAAATAAAGATTGAATTGGAAAAGCTAGCACAACATCAATTTCCTAGAGTAGAAGCAGAATTACAAGCCACAATGACTGAATTGGAGCATTCGAAGAAAGTTAGAATGGAGGTGGAGGAAGAACTTGCCACCTACAAGAAGGAAAGCCAAAATAAGGATGATCAACTTGCTTTAGTTAATTCCAAGTTAGAAAACACCAAGTCCTTATTAGAGTTATCCAACAAAAATTTGAAGGAGCTTGAGGATCAACTTCTCATTTGCAACAAGGAAAAGCAAAAGATGGAAACAAAACTAGAAAAGATGGAAGATGAGCTTTCTTTGGCAAAACAAGACTTAGAATTCACCAAGAACAAATGGGAGTCACTAGCAAAGTCCACAAATGAAAAGCTAGATCAAGTTCTAAATTCCATGTTATGGATGGGTACTATAAGATCACAAGGCACAGGATGTGAAGATGCCTTTTTAGCATTCAAAGAATTGGACACTTCCATCTATACTCTCCCAATTGCTCAAGAACTTCCTGATTCAATTAACAACTTGGTAATTTCAGCCACGAGTGAAGAAAATATTGATCATCAAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_320699.p1 GENE.S_Transcript_320699~~S_Transcript_320699.p1 ORF type:complete len:350 (+),score=71.01 S_Transcript_320699:126-1175(+)
MTIYNLDETPDIFICPAFLNNKFVYHMDRIKAEQDKARIHTIDFKSDKVFVYGVEIQESMLDKLYDCLIFRTRPGLIAVNCDGACYILIPGICYRPIHNVIFDWSPFGITVPKSANDSLRKENEELKKQLSTCELELQKSFKLQKELSACMEEKEKIKIELEKLAQHQFPRVEAELQATMTELEHSKKVRMEVEEELATYKKESQNKDDQLALVNSKLENTKSLLELSNKNLKELEDQLLICNKEKQKMETKLEKMEDELSLAKQDLEFTKNKWESLAKSTNEKLDQVLNSMLWMGTIRSQGTGCEDAFLAFKELDTSIYTLPIAQELPDSINNLVISATSEENIDHQG*

Click here to download the sequence:
Link to NCBI Protein BLAST