Transcript Information: S_Transcript_321608.p1


Annotated TAIR IDAT5G46920.1
Annotated Gene NameIntron maturase, type II family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19053668-19055875 | Forward length=735
E-Value8.8E-292
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9570001372423
Replicate 22.8089199668132
Replicate 32.5187996040103
Condition 2: 8 Hour
Replicate 13.7023247078356
Replicate 24.3500816799468
Replicate 34.0460636657604
Condition 3: 24 Hour
Replicate 12.8823110161201
Replicate 22.5706638130579
Replicate 32.452143206053


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_321608.p1 GENE.S_Transcript_321608~~S_Transcript_321608.p1 ORF type:internal len:432 (-),score=76.95,RVT_1|PF00078.23|6.3e-05,RVT_1|PF00078.23|4.2,RVT_1|PF00078.23|4.4e+03,Intron_maturas2|PF01348.17|1.1e-06 S_Transcript_321608:1-1293(-)
GGTGCTAGGTTGAACTTTTTTATTAAGTCTTCTAGGGATAAAACTGATTATGAATCGTTGTCTAAGAGGAAGATTAAGAATATATTGACTACTACGCAACCGACCCCTTTTCAAGATAGGATTGTTCAGGAGGTTCTGTTGATGGTTTTGGAGCCGGTTTATGAGGCTCGGTTTTCTCAGAAATCGTATGCGTTTAGGCCTGGCAGGACTCCTCATACTGTTTTGAGGGTTATTAGGAGGAGCTTTGCGGGGTACTTGTGGTATATAAGAGGTGATTTGAGTACCATTCTTGATGGCATGAAGGTGGGTATGGTTGTAAATGCTTTAATGAGGGATGTTAGGGACAAGAAGGTGATTGATTTGATAAGATCAGCGTTGGTGACGCCAGTGATTGTGACAAAGATTGAGGATGAGAAAAAGAAGAAGAAGACGAAAAGGAAGTATCAGAAGAAGAGGGTGTTGGCGGAGGATGAACCGAAGCCTGATCCCTACTGGTTAAATACGTTTTTCGGGTTTGCTCCAGAGGAGGCAGAAAAGGTTCCGTCTTGGGGTCACTGTGGGATTCTTAGTCCTCTCTTGGCAAACATATGCCTGAATGAATTGGATCATTGGATGGAGGGTAAGATCAAGGAGTTTTATTGTCCCTCGAAAAGTGATGTCATATGGAATACACCTGAGGGCGAATCAGAACAGGGGAATACTTCTTGGCCTGAGTTTGTTCCCACCAGTGGGCCTGACAAGACCCGCAAGATGGATTATATACGATATGGAGGTCATATTTTGATTGGAATTCGAGGGCCTAGAGCTGATGCGGCAATATTGAGAAAGCAATTGATTCAATTCTGTGATCAGAAATATCTCCTGAAGCTTGACAATGAGAGCTTACCCATTGAGCATATCACTAAGGGTATCATGTTTCTTGACCATGTGTTATGTCGAAGAGTTGTTTACCCCACACTGCGCTACACTGCCACTGGAGGTAAAATTATCAGTGAGAAGGGTGTAGGAACCCTTTTATCAGTTACAGCAAGTCTCAAACATTGTATTAAGCAATTCAGGAAACTGAACTTTCTCAAGGGTGATCGAGACCCAGATCCACAGCCTTGTTTCAGAATGTTCCATGCTACACAAGCACATACAAATGCGCAGATGAACAAGCTCCTCTCCACTATGGTTGAGTGGTACAGGTATGCTGATAACAGGAAGAAGGTGGTCAATTTTTGTTCTTACATCATCAGAGGTTCACTTGCCAAACTTTATGCTGCAAAATATAAGCTTCGGTCACGTGCAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_321608.p1 GENE.S_Transcript_321608~~S_Transcript_321608.p1 ORF type:internal len:432 (-),score=76.95,RVT_1|PF00078.23|6.3e-05,RVT_1|PF00078.23|4.2,RVT_1|PF00078.23|4.4e+03,Intron_maturas2|PF01348.17|1.1e-06 S_Transcript_321608:1-1293(-)
GARLNFFIKSSRDKTDYESLSKRKIKNILTTTQPTPFQDRIVQEVLLMVLEPVYEARFSQKSYAFRPGRTPHTVLRVIRRSFAGYLWYIRGDLSTILDGMKVGMVVNALMRDVRDKKVIDLIRSALVTPVIVTKIEDEKKKKKTKRKYQKKRVLAEDEPKPDPYWLNTFFGFAPEEAEKVPSWGHCGILSPLLANICLNELDHWMEGKIKEFYCPSKSDVIWNTPEGESEQGNTSWPEFVPTSGPDKTRKMDYIRYGGHILIGIRGPRADAAILRKQLIQFCDQKYLLKLDNESLPIEHITKGIMFLDHVLCRRVVYPTLRYTATGGKIISEKGVGTLLSVTASLKHCIKQFRKLNFLKGDRDPDPQPCFRMFHATQAHTNAQMNKLLSTMVEWYRYADNRKKVVNFCSYIIRGSLAKLYAAKYKLRSRAK

Click here to download the sequence:
Link to NCBI Protein BLAST