Transcript Information: S_Transcript_32176.p1


Annotated TAIR IDAT3G54480.1
Annotated Gene NameSKP1/ASK-interacting protein 5
Annotated Gene Symbol(s)SKIP5, SKP5
Annotation TypeOrtholog
Chromosome Positionchr3:20170883-20173325 | Reverse length=274
E-Value7.7E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3266251543976
Replicate 22.7578486946894
Replicate 33.3196924950481
Condition 2: 8 Hour
Replicate 13.9451972086696
Replicate 24.6980882143426
Replicate 36.7144919955691
Condition 3: 24 Hour
Replicate 12.5121616014183
Replicate 21.5864668103443
Replicate 33.0266453286139


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_32176.p1 GENE.S_Transcript_32176~~S_Transcript_32176.p1 ORF type:3prime_partial len:200 (+),score=39.01,F-box-like|PF12937.3|5.6e+03,F-box-like|PF12937.3|1.1e-08,F-box-like|PF12937.3|1.1e+04,F-box|PF00646.29|1.7e-06 S_Transcript_32176:121-717(+)
ATGGCTTCAATGGCAAAGCAGCAGCCTGAACCATCAAACCCCTCTTCAATAATCTCTGAATTATCTTCAGAGCTGCTACTGGGTATCCCCAATATGGGAGAAAACCAACAAAACAAAAACAAGAGCAACAAATGGAGGAGATTATCAAAGCATGGTTCTTTTACCCTTGATTCCCCAATTAATTTATTGGATGATGGGTGTCTCATGCATATCCTCAGCTTTCTTTCTCCTATCCCAGATCGCTATAACACCGCCCTCGTTTGCCACAGATGGCGTTTCTTGGCGTGCCACCCACGCTTATGGCTGCGGGTAGATCGGACTATTAAGGATTTATCTGAGCATAATGTATTCCCCACTACTGAAGCTGCTGTCTCTGCTGCAAGGCCTGGTGATACCATCCTGATTGCAGCTGGAGGGGTCCATATTAGCTCCAACATTCAGATCAAAAAGCCCCTCTGCCTGATTGGTGGCGGTGAGATCCCTGAAGAAACAACTCTTGTTTGTTCTCGAGGCTCTGACAGTGCACTGGAATTTCTTTCGACCTGCAAAATTGCGAATTTAACTGTGAAGGCGGAGCTGGGTTGCTGCTTGCTTCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_32176.p1 GENE.S_Transcript_32176~~S_Transcript_32176.p1 ORF type:3prime_partial len:200 (+),score=39.01,F-box-like|PF12937.3|5.6e+03,F-box-like|PF12937.3|1.1e-08,F-box-like|PF12937.3|1.1e+04,F-box|PF00646.29|1.7e-06 S_Transcript_32176:121-717(+)
MASMAKQQPEPSNPSSIISELSSELLLGIPNMGENQQNKNKSNKWRRLSKHGSFTLDSPINLLDDGCLMHILSFLSPIPDRYNTALVCHRWRFLACHPRLWLRVDRTIKDLSEHNVFPTTEAAVSAARPGDTILIAAGGVHISSNIQIKKPLCLIGGGEIPEETTLVCSRGSDSALEFLSTCKIANLTVKAELGCCLLH

Click here to download the sequence:
Link to NCBI Protein BLAST