Transcript Information: S_Transcript_32181.p1


Annotated TAIR IDAT3G54480.1
Annotated Gene NameSKP1/ASK-interacting protein 5
Annotated Gene Symbol(s)SKIP5, SKP5
Annotation TypeOrtholog
Chromosome Positionchr3:20170883-20173325 | Reverse length=274
E-Value2.8E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4132112601053
Replicate 23.6586535447135
Replicate 32.6876349066554
Condition 2: 8 Hour
Replicate 13.7506967894455
Replicate 26.5204382970058
Replicate 35.0343961680107
Condition 3: 24 Hour
Replicate 12.0856923935743
Replicate 25.2388710176481
Replicate 33.6755743102933


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_32181.p1 GENE.S_Transcript_32181~~S_Transcript_32181.p1 ORF type:complete len:199 (+),score=37.69,F-box-like|PF12937.3|5.6e+03,F-box-like|PF12937.3|1.1e-08,F-box-like|PF12937.3|1.1e+04,F-box|PF00646.29|1.7e-06 S_Transcript_32181:121-717(+)
ATGGCTTCAATGGCAAAGCAGCAGCCTGAACCATCAAACCCCTCTTCAATAATCTCTGAATTATCTTCAGAGCTGCTACTGGGTATCCCCAATATGGGAGAAAACCAACAAAACAAAAACAAGAGCAACAAATGGAGGAGATTATCAAAGCATGGTTCTTTTACCCTTGATTCCCCAATTAATTTATTGGATGATGGGTGTCTCATGCATATCCTCAGCTTTCTTTCTCCTATCCCAGATCGCTATAACACCGCCCTCGTTTGCCACAGATGGCGTTTCTTGGCGTGCCACCCACGCTTATGGCTGCGGGTAGATCGGACTATTAAGGATTTATCTGAGCATAATGTATTCCCCACTACTGAAGCTGCTGTCTCTGCTGCAAGGCCTGGTGATACCATCCTGATTGCAGCTGGAGGGGTCCATATTAGCTCCAACATTCAGATCAAAAAGCCCCTCTGCCTGATTGGTGGCGGTGAGATCCCTGAAGAAACAACTCTTGTTTGTTCTCGAGGCTCTGACAGGTTTGCAAAAGTGTTTTTGCTTTATGCCTTCTGCCTGATGATGTTATGTTTTCATGAGCTCATCCAAACTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_32181.p1 GENE.S_Transcript_32181~~S_Transcript_32181.p1 ORF type:complete len:199 (+),score=37.69,F-box-like|PF12937.3|5.6e+03,F-box-like|PF12937.3|1.1e-08,F-box-like|PF12937.3|1.1e+04,F-box|PF00646.29|1.7e-06 S_Transcript_32181:121-717(+)
MASMAKQQPEPSNPSSIISELSSELLLGIPNMGENQQNKNKSNKWRRLSKHGSFTLDSPINLLDDGCLMHILSFLSPIPDRYNTALVCHRWRFLACHPRLWLRVDRTIKDLSEHNVFPTTEAAVSAARPGDTILIAAGGVHISSNIQIKKPLCLIGGGEIPEETTLVCSRGSDRFAKVFLLYAFCLMMLCFHELIQTA*

Click here to download the sequence:
Link to NCBI Protein BLAST