Transcript Information: S_Transcript_32188.p1


Annotated TAIR IDAT5G17920.1
Annotated Gene NameCobalamin-independent synthase family protein
Annotated Gene Symbol(s)ATCIMS, ATMETS, ATMS1
Annotation TypeOrtholog
Chromosome Positionchr5:5935771-5939195 | Forward length=765
E-Value2.8E-282
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1345.03849153863
Replicate 2352.38749195359
Replicate 3342.20088397543
Condition 2: 8 Hour
Replicate 1146.84196502753
Replicate 2136.99497989875
Replicate 3162.2786906244
Condition 3: 24 Hour
Replicate 1284.13624680074
Replicate 2332.50822858166
Replicate 3335.70599895854


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_32188.p1 GENE.S_Transcript_32188~~S_Transcript_32188.p1 ORF type:3prime_partial len:429 (+),score=132.09,Meth_synt_1|PF08267.8|5.3e-120 S_Transcript_32188:150-1433(+)
ATGGCATCTCACATTGTTGGATACCCACGTATGGGCCCCAAGAGAGAGCTCAAGTTTGCCCTTGAGTCTTTCTGGGATGGCAAGAGCAGTGCCGAGGATTTGAAGAAGGTGTCTGCTGATCTCAGGGCATCCATCTGGAAGCAGATGTCTGATGCTGGTATCAAGTACATTCCCAGCAACACCTTCTCTTACTACGACCAGGTCCTTGACACCACCGCCATGCTCGGTGCTGTCCCCCCCAGATATGGGTGGAACGGTGGTGAGATCGGATTTGACGTTTACTTCTCTATGGCCAGAGGTAATGCCTCTGTGCCTGCTATGGAAATGACCAAGTGGTTTGACACCAACTACCATTACATTGTTCCTGAGTTGGGACCAGAAGTGAACTTCTCTTACGCTTCCCACAAGGCTGTTGAGGAGTACAAGGAGGCCAAGGCGCAAGGAGTGGACACTGTCCCAGTTCTCATTGGACCAGTCTCCTACTTGTTGTTGTCCAAGCCTGCTAAGGGTGTTGAGAAATCATTCAACCTTCTCTCACTCCTTCCCAAGATCCTACCAATCTACAAGGAAGTTGTGACAGAACTCAAGGGAGCTGGTGCTTCATGGATTCAGTTTGATGAGCCTCTTTTCGTTATGGATCTTGACTCTCACAAATTGCAAGCCTTCACTGAGGCTTACACTGAACTTGAATCTACCTTGTCTGGTGTGAATGTTGTGGTTGAGACTTACATGGCTGATGTTACCGCCGAGGCATACAAGACCCTTGTCTCTTTGAAGGCTGTTACTGGATTTGGATTTGACTTGGTTCGTGGAACAAAGACCTTGGACTTGATCAAAGCCGATTTCCCCGCTGGCAAATACCTTTTCGCTGGTGTAGTTGATGGAAGGAACATTTGGGCCAATGATCTTGCTGCTTCCCTTGCTACCCTCCAGAGTCTTGAGGGCATTGTTGGAAAGGACAAGCTTGTTGTCTCCACCTCCTGCTCACTTCTTCACACCGCTGTTGATCTCATCAACGAGACTAAGCTCGATGATGAAATCAAGTCATGGCTTGCATTTGCTGCCCAGAAGGTTGTTGAAGTAAATGCTTTGGCCAAGGCTTTGGCTGGACAGAAGGACGAGGCCTTCTTCTCTGCCAATGCTGCTGCTCAGGCTTCAAGGAAGTCCTCTCCTAGAGTGACAAATGAAGCCGTTCAAAAGGCTGCTGCTGCCTTGAAGGGCTCAGACCACCGCCGTGCAACCAATGTCAGTGCTAGACTTGATGCTCAGCAGAAGAAGCTTAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_32188.p1 GENE.S_Transcript_32188~~S_Transcript_32188.p1 ORF type:3prime_partial len:429 (+),score=132.09,Meth_synt_1|PF08267.8|5.3e-120 S_Transcript_32188:150-1433(+)
MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVSADLRASIWKQMSDAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYGWNGGEIGFDVYFSMARGNASVPAMEMTKWFDTNYHYIVPELGPEVNFSYASHKAVEEYKEAKAQGVDTVPVLIGPVSYLLLSKPAKGVEKSFNLLSLLPKILPIYKEVVTELKGAGASWIQFDEPLFVMDLDSHKLQAFTEAYTELESTLSGVNVVVETYMADVTAEAYKTLVSLKAVTGFGFDLVRGTKTLDLIKADFPAGKYLFAGVVDGRNIWANDLAASLATLQSLEGIVGKDKLVVSTSCSLLHTAVDLINETKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEAFFSANAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLN

Click here to download the sequence:
Link to NCBI Protein BLAST