Transcript Information: S_Transcript_322962.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value9E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.17819068679807
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.10948701244612
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_322962.p1 GENE.S_Transcript_322962~~S_Transcript_322962.p1 ORF type:complete len:207 (-),score=42.68,gag_pre-integrs|PF13976.2|2.1e-13,rve|PF00665.22|2.9e+03,rve|PF00665.22|3.3e-11 S_Transcript_322962:1298-1918(-)
ATGAATAGCTTCGGTGCAGGAAAATGGAAACTCACAAGAAGTAGCATTATAGTGGCTCGAGGAAGAAAAGAAGGCTCATTGTATGTTACACAAGCCAAGCTGTGCAAGGGGGAGACTAATGTTGCTCATGATAATTCGTGCTTGGAGATATGGCACAAGAGATTGGGACATATGAGTGAGAAGGGTTTGCAGGTCCTTACTCGCAAAGAGCTCCTCTCAGATATGAAAGGTAAAACTCTTGAGCGCTGCACTCATTGTTTGGCTGGAAAACAACATAGAGTTTCATTTTCTAGAAGCAATCCTCCAAGAAGAAGAAACCATGTTCTTGATTTGGTTCACACCAATGTATGCTCGATGACCGAGAAATCACTAGGTGGTGCATCATATTTTGTGAGATTTATCGATGACCATTCAAGAAAGGTGTTCGTGTCTTTGTTAAAGACTAAAGATCAGGTGCTCGAGTCATTTAAGGAGTTCCATGCTCGGGTGGAGCGTGAAACAGGAAGAAAGCTCAAGTGTGTTCGAGCTGACAATGGTGGAGAGTATCGTGGTCCATTCGAGACATATTGCAAGCAACATAGCATCAGGCTGGAGAAGACTCCTCCAAAAACAGCTGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_322962.p1 GENE.S_Transcript_322962~~S_Transcript_322962.p1 ORF type:complete len:207 (-),score=42.68,gag_pre-integrs|PF13976.2|2.1e-13,rve|PF00665.22|2.9e+03,rve|PF00665.22|3.3e-11 S_Transcript_322962:1298-1918(-)
MNSFGAGKWKLTRSSIIVARGRKEGSLYVTQAKLCKGETNVAHDNSCLEIWHKRLGHMSEKGLQVLTRKELLSDMKGKTLERCTHCLAGKQHRVSFSRSNPPRRRNHVLDLVHTNVCSMTEKSLGGASYFVRFIDDHSRKVFVSLLKTKDQVLESFKEFHARVERETGRKLKCVRADNGGEYRGPFETYCKQHSIRLEKTPPKTAE*

Click here to download the sequence:
Link to NCBI Protein BLAST