Transcript Information: S_Transcript_323176.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44061260323147
Replicate 20.65750035105177
Replicate 30.61068662528479
Condition 2: 8 Hour
Replicate 10.63552487700065
Replicate 20.4444738140343
Replicate 30.63524049153918
Condition 3: 24 Hour
Replicate 10.72334051293358
Replicate 20.45027440217909
Replicate 30.417583516641


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_323176.p1 GENE.S_Transcript_323176~~S_Transcript_323176.p1 ORF type:5prime_partial len:302 (+),score=31.93,RVT_1|PF00078.23|2.2e-06 S_Transcript_323176:3-908(+)
CTTATCTTCATCCTGTATATGGAATTTTTGTGTAAGCTTATCCACAATGCTTGTGAGGACAAATCCTGGACCCCTTTTTCATTCTCTAAATCTGGTCTTGTGATCTCCCACCTCATGTTTGCGGATGATGTCATTCTTTTTAGGGAGGGTAATACCCAAACACTTCATGCTCTGGAGTCTACCCTGCTTTTGTTTTCCCAGGCCTCTGGCCAAAAAATCAATGTGAGTAAGAGTACTCTGTTCTTCTCCCCTAACACAACCCCGGACATAATCCAAACCTTTGAGGACATCTTGGGTACAAAATCTTCTTCTAACCTTGGAACCTACCTTGGTCTTCCTCTTACCACTAAGCGACCCTCCAAAAACCAGCTGAGAGGTATTGTTAATAAGATTAGGGAGAAGCTTGCGTTCTGGAAAACAAAGTTCATCACTAGGGCGCGAAGAGCTTGCCTCATTAATGCTACCCTTAACGCTATCCTTAACTATTTCATGCATAGCCTTGCTTTTCCCAGGAGCCTTTCCAAAGAGATGAATAGAACCATTAATAATTTCCTTTGCGGTGATTCTGTGGAACACAGGAAGCTATACCCTGTGGGATGGGAGACTGTCATCCAACCTAAGGCCCAAGGGGGTCTGGGGATCCGTGAATTGGGGGATCTCAACAAAGCCCTTATAGTGAAACTTGGTTGGAAAACTCTTCTTCTTGATGATAATTTAGCTACTCTTGTTCTAAAGGATAAGTACGTCCATAACAAAACCTACCCTACCCCATTTAGTGGTGGTTCCCATGTTTGGCAAGATATTGGAAAAGGATGGAATACTTTAGAGAGTCATGTTTTCTGGACCTTGGGTAATGGAGCTAGGGTTCATTTTGGATGGATCATTGGCTCCCTTGTGGTACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_323176.p1 GENE.S_Transcript_323176~~S_Transcript_323176.p1 ORF type:5prime_partial len:302 (+),score=31.93,RVT_1|PF00078.23|2.2e-06 S_Transcript_323176:3-908(+)
LIFILYMEFLCKLIHNACEDKSWTPFSFSKSGLVISHLMFADDVILFREGNTQTLHALESTLLLFSQASGQKINVSKSTLFFSPNTTPDIIQTFEDILGTKSSSNLGTYLGLPLTTKRPSKNQLRGIVNKIREKLAFWKTKFITRARRACLINATLNAILNYFMHSLAFPRSLSKEMNRTINNFLCGDSVEHRKLYPVGWETVIQPKAQGGLGIRELGDLNKALIVKLGWKTLLLDDNLATLVLKDKYVHNKTYPTPFSGGSHVWQDIGKGWNTLESHVFWTLGNGARVHFGWIIGSLVVL*

Click here to download the sequence:
Link to NCBI Protein BLAST