Transcript Information: S_Transcript_323176.p2


Annotated TAIR IDAT2G33160.1
Annotated Gene Nameglycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:14053404-14056246 | Forward length=664
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.6314949445636
Replicate 20.52352382000883
Replicate 30.1875532483078
Condition 2: 8 Hour
Replicate 10.36144729351073
Replicate 20.3791838752496
Replicate 31.0838566578804
Condition 3: 24 Hour
Replicate 10.37025226255244
Replicate 20.76826479919822
Replicate 31.367975289769


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_323176.p2 GENE.S_Transcript_323176~~S_Transcript_323176.p2 ORF type:complete len:295 (+),score=37.08,RVT_3|PF13456.2|1.1e-11 S_Transcript_323176:1307-2191(+)
ATGCGGGAGGATACCATCCACGTCCTGCAAGACTGTAGGGAGGCTAGGAAAATCTGGGCCCGTTTTGACCTACCCCCTAATTTTTTCTCTCTTGATCTTCATTCTTGGCTGAAGCTTAACATCACTTCCACAAAATTTGCCCACCTCATCCCCTGCAGTGTTCTTTTTTCCTTTCTTGTTTGGGGTGTATGGAATCGGAGGAACATTGGCATCTTCACAAATAAATCCATCCCTATTCCTGTGTGGACCCAACAAACAATCTTCCAAGCTACTGAGTTTTTTACTTCCTCACCGAGCCCTATCACCACTAGCCCAAAGCCCCTAGGTATTATTCCCTCTTGGGAGCCACCCCCACCTGATCGAATCAAGGTCAATACAGTTGCTGCGTTTGTCTTTGGATCTTGTGCAGGTATCGCAGGTGTTGCACGGGACAATCATGGGAGATGGTTATGGGGTTTCCAAGTAAAAATCTCTTGCCATAACCCATTGATGGCCGAGTTGCTGACAATCAAGGAAGCGATGGTTCAATGCTCCAAGAGATCTCACGTTGCAGCATGGATAGCCTCAGATTGTGCACAAGCCATTGAACTCATTGACGGATCCAATGCACCAAAATCAATTGTGACTAACCTGGTAATGGAATGTAGGGAGCTGAGGAGTGGTACTACTACGATCCAGATGAAACAAGAAGCGAGGGAGAACAACAAAGTCGCCGACTTCATGGCTAAGGAAGCAAGAAACTTATCTTCTGGAGAACTTCTAACTTTTGACTTTGCCCCAATATTTTGTAAACATCTTTTAGATGAAGACTATTTGGAGCAAACTGATGTACCCCCTGTTGTACAACACCATAGTGCTGGTGTTGACATAGCCGACTATGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_323176.p2 GENE.S_Transcript_323176~~S_Transcript_323176.p2 ORF type:complete len:295 (+),score=37.08,RVT_3|PF13456.2|1.1e-11 S_Transcript_323176:1307-2191(+)
MREDTIHVLQDCREARKIWARFDLPPNFFSLDLHSWLKLNITSTKFAHLIPCSVLFSFLVWGVWNRRNIGIFTNKSIPIPVWTQQTIFQATEFFTSSPSPITTSPKPLGIIPSWEPPPPDRIKVNTVAAFVFGSCAGIAGVARDNHGRWLWGFQVKISCHNPLMAELLTIKEAMVQCSKRSHVAAWIASDCAQAIELIDGSNAPKSIVTNLVMECRELRSGTTTIQMKQEARENNKVADFMAKEARNLSSGELLTFDFAPIFCKHLLDEDYLEQTDVPPVVQHHSAGVDIADYG*

Click here to download the sequence:
Link to NCBI Protein BLAST