Transcript Information: S_Transcript_323442.p1


Annotated TAIR IDAT5G45500.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18432636-18434951 | Reverse length=771
E-Value2E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69077462222463
Replicate 20.66308930364116
Replicate 30.55428988229401
Condition 2: 8 Hour
Replicate 10.61179398450791
Replicate 20.64181532982822
Replicate 30.84448030129024
Condition 3: 24 Hour
Replicate 10.77591116223422
Replicate 20.58826833326585
Replicate 30.72358324113038


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_323442.p1 GENE.S_Transcript_323442~~S_Transcript_323442.p1 ORF type:complete len:732 (+),score=140.96,LRR_4|PF12799.3|3.2e+03,LRR_4|PF12799.3|0.00057,LRR_4|PF12799.3|6.8,LRR_4|PF12799.3|35 S_Transcript_323442:271-2466(+)
ATGTCTTCCTCCACCACCACCTCATTGGCTAGTCTTTCTCCCCTCATTGATTGGCATTCAAATCTAGCAGCCCTGTTGCACAAAGCCATATCTACAAAAGGTTCTAATCCCACAATTAGCAATGGTAGCTCAAACAACACCGAGATCCCCGAACATGACTCAGCAGACTCTGACAGCGTCTATGAACAAGTAAAACTTATCATTAATAAGTTGCAAAACTATGCCACATTGTTCAAGGACCCAGTCCTCAAAAGGGGTATGGCTACTGTCATGGATGAAATTGAAGGGATTATTCGAAGGTTTGTGGATAACAGCAAGGCCAAGTCTGATTCATATGAGAAACTTTGGAAGGAAGTCAAGGTCTTAAAATCTCAGGAAAAACAATCTTCTCCTAGTAGTGCTGCTCATTCTTCCCTCGTTCATTGTGGTTCATGTCTAGCTGACTTGCTCCTTAGAGCCAAAACAACCAATGGTGGCTCAAAGAAGACTGAGATCCTGGACCAGGACTCATATGCAAAAAGGGTTCATGGAGTAGTTGAAGCCGTCATTGATGGATTGCTGGAATACTCCAATAGTGAACGAGATCCAGTTCTTAACGAATCTATGGTTAAGGTCATGCGGAAAATCCAAGAGATTCTTCAAGAACTTGTCAAGATATACAGCTACGAGGCTGTGGCAGAACCATACAAGAAACTCATTGAAAAGGTCAATGACTTCATATCTCAGGTGGAGAAATCTTCTGCTGATCATGCCGTTTCCTCATCTTTGCCAGCTGAAACACTGCAGGCTGCTTCTAGTATCAGCAGTCAGAAACCAGAACCAGAGTCTGATGAGTTTCAGAGTAAACTGGAAAACCTGACTGCTGATGAGAAGCAATGTCTATTCTGCTTCTCTTGGTTCCCACAAGATGTGGCAATAAAGAAAAGGGATCTGATCTTTATGTGGATTGGAATGGGTTTAGTAAGCGAATGCTCAGATGGCGAAGGTAAACTAGCGGCTGAGCAAGTAGTCAGAAAGCTTGTTGCAAAAGGGTTGGTTGATCCTCTGATCATAAATAAGAAGTTGTCAAGTAGGTATAGGATGCATGCTAGCATTCACTCCAAGGTGACACAAGCAGCTGTCATAGCGACACAAGAAGGCTCCTTCTCTACAGTGCATGATATAAAAGATGTTCAAATTCAACCGCCAAAATCAGAAAAGATCGAGGGATTGCTCAACATCAGTGAGCACTTCCTCGATGCTAAGACTTTGGAAAGGGTGTCGAAAATGAAAGATGCTAAAGTTGTGCACCTTGGAAGCTGGGGCAGCTGGCATCAAGGCAAGACGAACAAGGAGTATATTGTAATTGAAGACATTGAATCCCTGCAGAAAGCTTTGAGGAATCTTGGGCAGGTGAGGCTTCTTGGCCTTCAAGGGATATCAGGCATAGTGAAACTTCCGGATTCAATTTGCAAGCTCGAGAATCTAGAGGTCTTGGATCTGAGGGCATGTAACAACTTGGAGTTGCTTCCTGCAGGGATTGGATCACTGCAAAAACTTACACACTTGGACCTGTCTGAGTGTTTCCTGCTTGATCACATCCCAAAGAATATCGTTACACTATCTAACCTTACGGTGCTTAAGGGGTTCGTGGTCAATTCAGATCAAAGTAATTCAACAGCTAGAAGAAACAGTATACGACAGTCAAATGCATCTTCATGTGCATTCAGCGACTTATCAAAACTAAAAAAGTTGAGAAAACTGACCCTTCGCACCAGAAGGATGAATTTTCCTACAAGACAGGATCTTCAGACTTTATGCCACATGCAACATTTAAGTCGTCTCAAAATTGCTTGGGTAGGGAATTCAAGTGACTGTCAGATTGATGGAGATTTAGATAGATTTCCAGCAACCGTTGAAAAACTGGAGCTCCGAACTGTACCCACGCGTGCAGCTTGTCAATTACTGGGGCTAATTAGGAAGGAAAGAAATAGCCGCTTGGAGAAACTCTACATCAAAGGAGGACTTCGGAAGCTGGATCCTGAGAAGCATCGCTTGGCTCAAGTTAACAAAGTACGTCTTAGATACTTGTCTCAACTAGACATGGACTGGGATGATTTCTTCAAGTCATTTCCAAACTTAAAATGTCTAGAAGTTTATGAATGTCCCCATCTCACCTTCTTCCCAGGCAATGAAAATGGTTGGTGGTACAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_323442.p1 GENE.S_Transcript_323442~~S_Transcript_323442.p1 ORF type:complete len:732 (+),score=140.96,LRR_4|PF12799.3|3.2e+03,LRR_4|PF12799.3|0.00057,LRR_4|PF12799.3|6.8,LRR_4|PF12799.3|35 S_Transcript_323442:271-2466(+)
MSSSTTTSLASLSPLIDWHSNLAALLHKAISTKGSNPTISNGSSNNTEIPEHDSADSDSVYEQVKLIINKLQNYATLFKDPVLKRGMATVMDEIEGIIRRFVDNSKAKSDSYEKLWKEVKVLKSQEKQSSPSSAAHSSLVHCGSCLADLLLRAKTTNGGSKKTEILDQDSYAKRVHGVVEAVIDGLLEYSNSERDPVLNESMVKVMRKIQEILQELVKIYSYEAVAEPYKKLIEKVNDFISQVEKSSADHAVSSSLPAETLQAASSISSQKPEPESDEFQSKLENLTADEKQCLFCFSWFPQDVAIKKRDLIFMWIGMGLVSECSDGEGKLAAEQVVRKLVAKGLVDPLIINKKLSSRYRMHASIHSKVTQAAVIATQEGSFSTVHDIKDVQIQPPKSEKIEGLLNISEHFLDAKTLERVSKMKDAKVVHLGSWGSWHQGKTNKEYIVIEDIESLQKALRNLGQVRLLGLQGISGIVKLPDSICKLENLEVLDLRACNNLELLPAGIGSLQKLTHLDLSECFLLDHIPKNIVTLSNLTVLKGFVVNSDQSNSTARRNSIRQSNASSCAFSDLSKLKKLRKLTLRTRRMNFPTRQDLQTLCHMQHLSRLKIAWVGNSSDCQIDGDLDRFPATVEKLELRTVPTRAACQLLGLIRKERNSRLEKLYIKGGLRKLDPEKHRLAQVNKVRLRYLSQLDMDWDDFFKSFPNLKCLEVYECPHLTFFPGNENGWWYK*

Click here to download the sequence:
Link to NCBI Protein BLAST