Transcript Information: S_Transcript_3236.p1


Annotated TAIR IDAT1G58100.1
Annotated Gene NameTCP family transcription factor
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21512680-21513885 | Reverse length=401
E-Value1.5E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.211676593706
Replicate 28.7827891284112
Replicate 310.039570961576
Condition 2: 8 Hour
Replicate 17.9778438596469
Replicate 29.2277169449232
Replicate 37.4631025187704
Condition 3: 24 Hour
Replicate 16.4434548425494
Replicate 26.2502118256114
Replicate 36.1694209336255


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3236.p1 GENE.S_Transcript_3236~~S_Transcript_3236.p1 ORF type:complete len:417 (+),score=81.66,TCP|PF03634.9|1e-36,TCP|PF03634.9|1.7e+02 S_Transcript_3236:117-1367(+)
ATGGAAGTCAGAGATTCCAACCGTTCTTCTCACCACCAGCACAACCAGATCATCCATCTTGATGGCTCCACCGCCGCTGCCGCGGCCACCAGCAGCAAGTCTCAGCCGCAGAAGCGGTCGACGAAAGACCGGCATACAAAGGTGGATGGGAGAGGGAGAAGGATACGTATGCCAGCAGCATGTGCAGCTAGAGTATTTCAGTTAACAAGGGAATTAGGACACAAGTCTGATGGTGAGACTATTGAGTGGCTTTTACATGAAGCTGAGCCTGCTATTATTGCTGCTACTGGTACTGGTACTATCCCTGCTAACTTCTCTACTCTTAATGTTTCTCTTCGTAGCTCTGCAGCTTCTTCTAAGTCTGTAGCTTCTCATACCTCTTTTCATTCTTCTTCTCCTGGTGCTGCTGTTGCTGCCCAATTTGCCTTTGCCCAACACCACCCCTCTAATTCCGCCCCTGATTCTATTTTCTCTCACCTCCAGCAACACCACCACCACCCGCATCAGGGTGTGTTCGGCCCCGCTGCCGGATTTCAATCCGGTGGCGGGGTTCCTGAAAATCATGATCAGTCCGAGTGTCCTGGAATGCCGTCCTCGAATAAGAAGACGGCGTCCGGAGGCCCTCTACCAGGGGCAGGCATGCCGGTATGGGCGGTGCCTGCGCCTGGTCAGGTCGTAGGAGGACCGGCCAATGGAGCTGGCGCTATTGGCAGCACGCTCTGGATGCTACCCTTGAGCGCCAGCTCCATTGGCCCTGTGGCCACATCTGAAGCTGGACCTATTGCGCAGGAGCAACAACAGGCTCAGCCTCAGATGTGGCCTTTTGGTGGTAGCGTACCTACCACCGCCAGCGGCACAACAACTGCAGCTTCATTGCAGTTTATGCCACAGTTTAGCATGAATACGACTCCAGGTATTGGGGGTGGTACAGCTATAGATTTTCAAGAGGATGGGAATAACAGCAATAACAGATCGCTTCAATTGGGATCAATGCTGTCACAACAACTTGGGATGAGGATGCCGGAACCTAATTTGGGAATGTTGGGTGCCTTGAATTCAGTTCATAATGATAATAATAATAATAGTAAAGCTTATAGATCAAGGGACCAAAAGCATGATACTACTGGCTGTACATTGGAGCATCACCAACACCAAAGCCAAAGGCAAACACCTGATATTGATGATGACGATGATGATAGCCGGGAAGATAACCACAATGAAGGCGAAAATGATCTAAATAGCTCGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3236.p1 GENE.S_Transcript_3236~~S_Transcript_3236.p1 ORF type:complete len:417 (+),score=81.66,TCP|PF03634.9|1e-36,TCP|PF03634.9|1.7e+02 S_Transcript_3236:117-1367(+)
MEVRDSNRSSHHQHNQIIHLDGSTAAAAATSSKSQPQKRSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLHEAEPAIIAATGTGTIPANFSTLNVSLRSSAASSKSVASHTSFHSSSPGAAVAAQFAFAQHHPSNSAPDSIFSHLQQHHHHPHQGVFGPAAGFQSGGGVPENHDQSECPGMPSSNKKTASGGPLPGAGMPVWAVPAPGQVVGGPANGAGAIGSTLWMLPLSASSIGPVATSEAGPIAQEQQQAQPQMWPFGGSVPTTASGTTTAASLQFMPQFSMNTTPGIGGGTAIDFQEDGNNSNNRSLQLGSMLSQQLGMRMPEPNLGMLGALNSVHNDNNNNSKAYRSRDQKHDTTGCTLEHHQHQSQRQTPDIDDDDDDSREDNHNEGENDLNSSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST