Transcript Information: S_Transcript_324169.p1


Annotated TAIR IDAT5G52020.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21124192-21124890 | Reverse length=232
E-Value1.7E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3147866307164
Replicate 22.1199121638893
Replicate 34.791173430971
Condition 2: 8 Hour
Replicate 14.5534641246547
Replicate 26.1303642180034
Replicate 35.6134260596748
Condition 3: 24 Hour
Replicate 11.4770561790793
Replicate 23.3068194826699
Replicate 32.6029867891401


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_324169.p1 GENE.S_Transcript_324169~~S_Transcript_324169.p1 ORF type:5prime_partial len:281 (+),score=47.19,AP2|PF00847.16|3.6e-09,AP2|PF00847.16|1.6e+04 S_Transcript_324169:2-844(+)
TGGATTTTACTCTCTCCAATAGTAGTACTAGAGAATAAAGATCATTTTCATTGCATTGCAAACCAACTAAAAATAGTCCATTCTTCCTTCAGTTATTGGGTACATTCCACAGATAGGAGTATTTATTTAGTTATAAATATGGGTGACAGAAATGAGTCTAGCTCCAATGTGAATCCACAAGACCAACAAAGTAAATCCCCACAACCAACTCAATTGCCACTCACTATATCAGTCCCATCTGTTGAGGAACCAGCTCAACAACCAGTGGTAGAAGCGGCAAGGCGCCCGGCCTCCGCCACGGCCACCACCTCATCCACGGGGTCTCCCACGGGGCGGCACCCCATGTACCGAGGAATCCGGACCCGAGGTGGGAAGTGGGTCTCGGAGATCCGGGAGCCCCGGAAGACAACCCGTATATGGCTTGGTACTTACCCTACCCCTGAGATGGCTGCGGCTGCCTATGACGTGGCAGCATTAGCCCTCAAGGGTAGCGAGGCTATGGTCAATTTCCCTGAGGATGTTATTAGATACCCAGTTCCGGCATCATCCTCGCCTGCTGATATCAGAAAAGCAGCGGCTGCAGCCGCCGCTTTGAGGCAGGCGAGAGACCAGAAGGCCGAAAATGATGATGAAAATTGCTTGTTGAGGCTTGACAAGGTTGGCAATGAAGAAGCTCCTCAAGAGGAATTTGTTGATCTTGAGGCTTTTTTTGACATGCCCAATTTGCTTGTTGATATGGCTGAGGCTATGATGGTGAGCCCTCCTAGGTTGACCTCCTCCCACAACAACGATGACTCCCCGGACGAGGGCGATGGTGGTAGCTTGTGGAGCTACGACCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_324169.p1 GENE.S_Transcript_324169~~S_Transcript_324169.p1 ORF type:5prime_partial len:281 (+),score=47.19,AP2|PF00847.16|3.6e-09,AP2|PF00847.16|1.6e+04 S_Transcript_324169:2-844(+)
WILLSPIVVLENKDHFHCIANQLKIVHSSFSYWVHSTDRSIYLVINMGDRNESSSNVNPQDQQSKSPQPTQLPLTISVPSVEEPAQQPVVEAARRPASATATTSSTGSPTGRHPMYRGIRTRGGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGSEAMVNFPEDVIRYPVPASSSPADIRKAAAAAAALRQARDQKAENDDENCLLRLDKVGNEEAPQEEFVDLEAFFDMPNLLVDMAEAMMVSPPRLTSSHNNDDSPDEGDGGSLWSYDQ*

Click here to download the sequence:
Link to NCBI Protein BLAST