Transcript Information: S_Transcript_324187.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value6E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18774604045983
Replicate 20.11673433628315
Replicate 30
Condition 2: 8 Hour
Replicate 10.22566550600141
Replicate 20.1972826158706
Replicate 30.15037634994696
Condition 3: 24 Hour
Replicate 10.53937983927393
Replicate 20.4796573878592
Replicate 30.57828320505557


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_324187.p1 GENE.S_Transcript_324187~~S_Transcript_324187.p1 ORF type:5prime_partial len:567 (+),score=55.33,zf-RVT|PF13966.2|1.9e-15,RVT_1|PF00078.23|6.2e-15 S_Transcript_324187:2-1702(+)
GGAGGTCTCACTAATTGGTTCAACCCTTCTAGAGGAATTAGGCAAGGAGACCCCCTCTCCCCCTACTTGTTTATTATTTGTATGAATATGCTTTCTCACATGATCACTGATAGCTGTTATAACAACTCTTGGAACCCCTTTCTTATTGGCAAGTCAAAGATACCCATTTCGCACCTAATGTTTGCTGATGACTTGATTCTCTTTGGGGAGGCTAGTATAGAAACGTTTCTTGTTGTTCAGCACACCTTGGAAAATTTTTGTGCAATGTCTGGGCAAAATATAAACCATAATAAAAGCAAGATCTTTTTCTCTCCTAACACTTCTGTTGATCTGATCGCTGAAGGAGAAAAAATTCTGAATGTGGATGCTAGTTCTGATTTGGGGCTATATTTAGGCTTCCCTCTCACCCCTAACCGACCCAAATTGTCTCAACTCAAATACATTGTTAACAAAGTCAAGGGAAAATTAGCAACCTGGAAGAGTCATTGCCTCTCTAGGGCTGGAAAAATTTGCCTAATAAACTCCACTCTCAATGCAATCCCAAACTACTACATGCATCATATCCACCTTCCTTGTGCTACTTTAGACAAACTTGATTCTATTGTCATTAACTTTCTATGGGGGGATTCTGAGGAAAAAAAGAGGTTGCATTTGGTGGATAAAGAGAGGATCTTTCTTCCAAAAGAGAGGGGTGGACTAGGAATCCGGAGTAACAAAACCATGAACTCGGTATACATGGCAAAAAGGAACTGGCAACTAATGAATGATAAGGAAAATTTGGCTCACAAAGTACTTAAAAGCAAGTATATCTTCAACAGACCCCATGGTGCAGTTGACTTTAACAAAGGGTCCTTTATCTGGAAAGACCTTGAAAGGGGTTGGGAGTTATTTCAAGCTAACATCCTTTGGATGGTAGGCAAGGGAGATCACATCTCCCTTTGGAATGATAATTGGAGCAGACTTGGGACTCTTCGATCGTTGATCTCTGGACCCCTAAGTCACTCTGAGACTGACCTCCTGGTCAGTGACTGTATTAGTCATTGCCAATGGGATTTCTCCAAGCTTTCCTTTTCCTTTCCCCCTGACTTACTCCATTCCTTGTTGGCTGTCCCAATTTCTCCTTCCGGTTCTGACTTTCCCTGTTCCTTGTTGGCTGAAAATGATAAATTTAATGCAAAAAATGCTTACAGTGATCTTTATTTAATAGGGATTGATGATGGTGATTGTTCTTGGATTTGGAAAATTCCTACTTTACCAAAAATCATGTTTTTCATTTGGACGGTGTGGCATGACCGGATTCCTCATAATGTTTTATTGTCTACTAGGAATTTGTTACCTTCCAATGTTTGCCATCTTTGTAATTTGAAAGCTGAAAATGCCTTGCATCTTTTAAGGGATTGCCGACTAAGAAAAAATGTTTGGAACTTTGATTGTGTATATGATGGTTTTTTCCAAAGTAATTTAAAGGACTGGCTTTTGCTTAACCTCACATCCAAACACTCTGTCAACAACCTTCCTTGGCCTACTCTTTTTGCCTCCATTATTTGGGTTCTTTGGAATTATAGAAACTTGTACGTATTTGAACATGTTCCCTTCCCTTCCCCTTCTACGATTAAGCATGCAGCCAACCAAAAAGCATGGGAATCTTGGAGCCTTCGAGATAACCCCCCTCTAATTCCATCAAAACTTTCATCATGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_324187.p1 GENE.S_Transcript_324187~~S_Transcript_324187.p1 ORF type:5prime_partial len:567 (+),score=55.33,zf-RVT|PF13966.2|1.9e-15,RVT_1|PF00078.23|6.2e-15 S_Transcript_324187:2-1702(+)
GGLTNWFNPSRGIRQGDPLSPYLFIICMNMLSHMITDSCYNNSWNPFLIGKSKIPISHLMFADDLILFGEASIETFLVVQHTLENFCAMSGQNINHNKSKIFFSPNTSVDLIAEGEKILNVDASSDLGLYLGFPLTPNRPKLSQLKYIVNKVKGKLATWKSHCLSRAGKICLINSTLNAIPNYYMHHIHLPCATLDKLDSIVINFLWGDSEEKKRLHLVDKERIFLPKERGGLGIRSNKTMNSVYMAKRNWQLMNDKENLAHKVLKSKYIFNRPHGAVDFNKGSFIWKDLERGWELFQANILWMVGKGDHISLWNDNWSRLGTLRSLISGPLSHSETDLLVSDCISHCQWDFSKLSFSFPPDLLHSLLAVPISPSGSDFPCSLLAENDKFNAKNAYSDLYLIGIDDGDCSWIWKIPTLPKIMFFIWTVWHDRIPHNVLLSTRNLLPSNVCHLCNLKAENALHLLRDCRLRKNVWNFDCVYDGFFQSNLKDWLLLNLTSKHSVNNLPWPTLFASIIWVLWNYRNLYVFEHVPFPSPSTIKHAANQKAWESWSLRDNPPLIPSKLSSC*

Click here to download the sequence:
Link to NCBI Protein BLAST